Factsheet for GSMUA_Achr1P06960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g01630.t01	Wine grape	mitochondrion	63.86	40.15
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	61.04	37.16
KRH21996	Soybean	mitochondrion	63.05	35.04
KXG36879	Sorghum	mitochondrion	61.04	34.16
PGSC0003DMT400039795	Potato	mitochondrion	61.45	34.0
Solyc12g014190.1.1	Tomato	mitochondrion	60.64	33.63
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	60.64	33.41
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	60.24	33.04
TraesCS7A01G560300.1	Wheat	mitochondrion	59.04	32.45
HORVU7Hr1G120070.12	Barley	mitochondrion	60.64	31.07
CDX70907	Canola	plastid	57.43	30.89
Bra020081.1-P	Field mustard	plastid	57.43	30.82
Bra006535.1-P	Field mustard	plastid	57.03	30.67
OQU77179	Sorghum	mitochondrion	61.45	30.3
CDX88863	Canola	plastid	56.22	30.24
AT5G20040.3	Thale cress	mitochondrion	56.63	30.06
GSMUA_AchrUn_...	Banana	cytosol	13.25	11.54
GSMUA_Achr4P06810_001	Banana	cytosol	13.65	11.11
CDY45111	Canola	plastid	9.64	10.91
GSMUA_Achr3P29480_001	Banana	cytosol	10.04	9.58
GSMUA_Achr11P...	Banana	cytosol	16.06	9.52
GSMUA_Achr1P23110_001	Banana	cytosol	11.65	9.39
GSMUA_AchrUn_...	Banana	mitochondrion	12.85	9.17
GSMUA_Achr3P09080_001	Banana	extracellular	10.84	8.08
GSMUA_Achr5P07950_001	Banana	cytosol	10.44	7.78
GSMUA_Achr2P06730_001	Banana	cytosol	2.81	6.73
GSMUA_Achr9P21400_001	Banana	cytosol	5.62	5.05
GSMUA_Achr1P12830_001	Banana	cytosol	0.4	0.83

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06960_001	EnsemblPlants:GSMUA_Achr1T06960_001	EnsemblPlantsGene:GSMUA_Achr1G06960_001	Gene3D:1.10.20.140	Gene3D:3.40.50.300	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	KEGG:00908+2.5.1.75
PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	PFAM:PF01715	SEG:seg	UniParc:UPI000296D0E6	UniProt:M0RXQ4
MapMan:35.1	:	:	:	:	:

Description

tRNA dimethylallyltransferase 9 [Source:GMGC_GENE;Acc:GSMUA_Achr1G06960_001]

Coordinates

chr1:-:5525261..5526605

Molecular Weight (calculated)

29252.8 Da

IEP (calculated)

7.867

GRAVY (calculated)

-0.555

Length

249 amino acids

Sequence
(BLAST)

001: MELQNSKQWD AAVDLVVKAG DPNARFLPTN NWYRLRRSLE IIRSSGMPPS AFSVPSLNTA KDLDYNFICF FLTGPRIDLY RSIDLRCEDM LMETEGLLSE
101: ASWLLDIGLH PNMNSATRAI GYRQAMEYLL SCREQGGRST PEEFRAFLSE FQKASRNFAK RQITWFRNEL IYYWLDASRP FEEVIDFICD AYHDQTGRLV
201: VPESLKMKKH TNGRQETYEL KSYRAQVKLF SRDQDCDHVM NWIRSTQRR

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.