Factsheet for GSMUA_AchrUn_randomP01160_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	73.08	59.89
AT5G19040.1	Thale cress	mitochondrion	52.8	45.76
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	51.05	45.48
VIT_05s0020g02630.t01	Wine grape	cytosol	51.05	44.24
VIT_09s0070g00710.t01	Wine grape	mitochondrion	47.9	44.19
KRH20915	Soybean	cytosol	23.78	44.16
CDX92563	Canola	mitochondrion	51.05	43.71
CDY13945	Canola	mitochondrion	50.7	43.41
CDY02590	Canola	cytosol	50.7	43.41
Bra023701.1-P	Field mustard	cytosol	50.0	43.2
CDY47191	Canola	cytosol	50.0	43.2
Bra002204.1-P	Field mustard	mitochondrion	50.35	43.11
GSMUA_Achr5P07950_001	Banana	cytosol	49.65	42.52
AT3G23630.1	Thale cress	mitochondrion, plastid	46.85	40.73
GSMUA_Achr3P09080_001	Banana	extracellular	47.55	40.72
CDX93935	Canola	plastid	47.2	40.42
GSMUA_Achr2P06730_001	Banana	cytosol	14.69	40.38
CDX89173	Canola	mitochondrion, plastid	46.5	39.82
Bra040431.1-P	Field mustard	mitochondrion, plastid	46.5	39.82
KRH11376	Soybean	extracellular	47.55	39.77
KRG95498	Soybean	mitochondrion	43.01	39.68
KRH02126	Soybean	plastid	46.85	39.41
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	45.1	39.21
Solyc09g064910.1.1	Tomato	mitochondrion	43.01	39.17
CDX77492	Canola	plastid	45.45	39.16
KRH71448	Soybean	golgi, mitochondrion, plastid	44.76	39.14
Bra028326.1-P	Field mustard	plastid	40.91	38.87
CDY63340	Canola	plastid	45.1	38.86
CDX85119	Canola	plastid	45.1	38.86
Bra014968.1-P	Field mustard	plastid	45.1	38.86
Bra007728.1-P	Field mustard	plastid	45.1	38.86
KRH67172	Soybean	plastid	41.96	38.84
PGSC0003DMT400083203	Potato	cytosol	44.76	38.79
AT3G63110.1	Thale cress	plastid	45.45	38.69
CDY67797	Canola	mitochondrion	44.76	38.55
KRH51017	Soybean	plastid	44.41	37.8
KRH31999	Soybean	mitochondrion	45.45	37.79
PGSC0003DMT400002509	Potato	mitochondrion	41.96	37.62
CDY18104	Canola	cytosol	34.97	35.34
GSMUA_Achr3P29480_001	Banana	cytosol	31.47	34.48
GSMUA_Achr4P06810_001	Banana	cytosol	35.66	33.33
GSMUA_Achr1P12830_001	Banana	cytosol	13.99	33.06
GSMUA_Achr1P23110_001	Banana	cytosol	33.22	30.74
GSMUA_Achr11P...	Banana	cytosol	34.97	23.81
GSMUA_Achr9P21400_001	Banana	cytosol	21.68	22.38
GSMUA_Achr1P06960_001	Banana	cytosol	11.54	13.25

Protein Annotations

KEGG:00908+2.5.1.27	KEGG:00908+2.5.1.75	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0003674	GO:GO:0003824
GO:GO:0004161	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSMUA_AchrUn_randomG01160_001	EnsemblPlants:GSMUA_AchrUn_randomP01160_001	EnsemblPlants:GSMUA_AchrUn_randomT01160_001	InterPro:IPT
UniProt:M0U5C8	InterPro:P-loop_NTPase	PFAM:PF01715	PFAM:PF01745	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49
SUPFAM:SSF52540	InterPro:Tzs	UniParc:UPI000296190B	SEG:seg	:	:

Description

Adenylate isopentenyltransferase 5, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01160_001]

Coordinates

chrchrUn_random:+:3848836..3849816

Molecular Weight (calculated)

31196.5 Da

IEP (calculated)

7.011

GRAVY (calculated)

-0.100

Length

286 amino acids

Sequence
(BLAST)

001: MGSFKSRGGK DKVVFVMGAT GTGKSRLAVD VAIHFGGEIV NSDKMQVYDG LDVESIARRG RLPIVAGGSN SYIEELVEGA GREFWRRYEC CFLWVDVQLP
101: VLHKFVAERV DRMVERGLVE EVRGLFDPDV ADYSRGVRRA IGVPEMDRYL RAEAAEADEA TKARLLEAAI DEIKANTCKL TCCQLQKIHR LCTLSGWNVH
201: RVDATDVFRR AGKEVDEAWA SLVAGPSVEI VAEFLHQAPA AEPKAAAREA QQFAAVNNKK GASLMNGAVG RDMVVKVASS LVGATV

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.