CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028326.1-P	Field mustard	plastid	95.41	89.7
CDX85119	Canola	plastid	85.16	72.59
CDX77492	Canola	plastid	84.81	72.29
AT3G23630.1	Thale cress	mitochondrion, plastid	79.86	68.69
CDY13945	Canola	mitochondrion	49.12	41.62
CDX92563	Canola	mitochondrion	48.76	41.32
CDY47191	Canola	cytosol	48.06	41.09
CDY02590	Canola	cytosol	48.41	41.02
VIT_05s0020g02630.t01	Wine grape	cytosol	44.88	38.48
KRH20915	Soybean	cytosol	20.14	37.01
HORVU5Hr1G110100.1	Barley	mitochondrion	38.16	35.76
GSMUA_AchrUn_...	Banana	cytosol	35.34	34.97
KRH51017	Soybean	plastid	39.93	33.63
KRH11376	Soybean	extracellular	40.28	33.33
KRH02126	Soybean	plastid	39.22	32.65
CDY67797	Canola	mitochondrion	38.16	32.53
CDY63340	Canola	plastid	38.16	32.53
OQU90772	Sorghum	plastid	38.16	31.76
Zm00001d013021_P001	Maize	plastid	37.81	31.75
CDX93935	Canola	plastid	37.46	31.74
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	36.75	31.61
Zm00001d034584_P001	Maize	plastid	36.75	31.61
CDX89173	Canola	mitochondrion, plastid	36.75	31.14
TraesCS5A01G460000.1	Wheat	plastid	38.52	31.05
PGSC0003DMT400083203	Potato	cytosol	36.04	30.91
Zm00001d005239_P001	Maize	plastid	37.81	30.84
TraesCS5B01G469600.1	Wheat	cytosol	37.81	30.48
TraesCS5D01G471100.1	Wheat	cytosol	37.81	30.48
GSMUA_AchrUn_...	Banana	mitochondrion	37.46	30.37
Os07t0211700-00	Rice	plastid	37.1	30.26
Os03t0810100-01	Rice	extracellular	37.81	29.97
Zm00001d019171_P001	Maize	plastid	38.16	29.67
TraesCS5A01G181100.1	Wheat	mitochondrion	30.39	29.45
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	30.39	29.35
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	30.39	29.35
Zm00001d040810_P001	Maize	cytosol	36.4	29.26
EER96067	Sorghum	plastid	37.1	29.01
Os03t0358900-00	Rice	cytosol	33.57	28.96
CDY04228	Canola	plastid	32.51	28.84
CDY07385	Canola	plastid	32.16	28.44
CDX95461	Canola	plastid	32.16	28.09
CDY44896	Canola	plastid	33.22	28.06
CDY22984	Canola	plastid	30.39	28.01
Os03t0356900-01	Rice	extracellular	32.16	28.0
TraesCS3D01G137000.1	Wheat	cytosol, plastid	34.63	28.0
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	32.16	27.91
CDY18571	Canola	plastid	31.8	27.78
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	33.92	27.75
CDX81518	Canola	plastid	33.92	27.59
Os05t0311801-00	Rice	cytosol	33.22	27.57
HORVU3Hr1G025950.1	Barley	cytosol	33.57	27.46
TraesCS3A01G136200.1	Wheat	mitochondrion	33.22	27.17
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	30.74	27.1
EES12063	Sorghum	cytosol	32.51	27.06
TraesCS5D01G185500.1	Wheat	plastid	30.39	26.79
EES02950	Sorghum	cytosol	34.63	26.63
Zm00001d003869_P001	Maize	cytosol	30.04	26.4
CDX82308	Canola	plastid	30.39	26.38
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	33.22	23.98
TraesCS1A01G057000.1	Wheat	cytosol	32.86	23.85
TraesCS1B01G323900.1	Wheat	plastid	21.2	21.43
CDY30532	Canola	cytosol	28.27	17.24
CDX77133	Canola	plastid	29.33	11.69
CDX88863	Canola	plastid	17.31	10.58
CDX70907	Canola	plastid	17.31	10.58
CDY45111	Canola	plastid	5.65	7.27

Protein Annotations

EnsemblPlants:CDY18104	EnsemblPlantsGene:GSBRNA2T00002608001	Gene3D:1.10.287.890	Gene3D:3.40.50.300	GO:A0A078FYB8	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	KEGG:00908+2.5.1.75
MetaCyc:PWY-2781	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	PFAM:PF01715	ProteinID:CDY18104	ProteinID:CDY18104.1
SEG:seg	UniParc:UPI0004EE9CA3	UniProt:A0A078FYB8	MapMan:11.4.1.1	:	:

Description

BnaA01g23650DBnaA01g23650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYB8]

Coordinates

chrLK032082:-:481461..482459

Molecular Weight (calculated)

31555.9 Da

IEP (calculated)

7.957

GRAVY (calculated)

-0.273

Length

283 amino acids

Sequence
(BLAST)

001: MKFSISAPKQ VQPILSFKNK PSIPLDPASL VSPSTLQHGV PHHLLGVFDS EDGNLTATDF TLLASQEIST LSANNKLPIV AGGSNSYIEA LANHSSGLLL
101: NNYECCFIWV DVSLPVLNSF VSKRVDRMME AGLLDEVRQV YDPKADYSVG IRRAIGVPEL HEYLRYESLV DRATQKKMLD VAVRKIKQNT EILACRQLQK
201: IQRLSKKWKS CMHHVDATEV FLKHNEEEAD EAWENLVARP TKRIVDKFSN RHVMKNDSVE HCLTTIGAAS YGGGSGSRAH NMI

Best Arabidopsis Sequence Match ( AT3G23630.1 )
(BLAST)

001: MKFSISSLKQ VQPILCFKNK LSKVNVNSFL HPKEKVIFVM GATGSGKSRL AIDLATRFQG EIINSDKIQL YKGLDVLTNK VTPKECRGVP HHLLGVFDSE
101: AGNLTATQYS RLASQAISKL SANNKLPIVA GGSNSYIEAL VNHSSGFLLN NYDCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVF NPKANYSVGI
201: RRAIGVPELH EYLRNESLVD RATKSKMLDV AVKNIKKNTE ILACRQLKKI QRLHKKWKMS MHRVDATEVF LKRNVEEQDE AWENLVARPS ERIVDKFYNN
301: NNQLKNDDVE HCLAASYGGG SGSRAHNMI

Arabidopsis Description

IPT7Adenylate isopentenyltransferase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94ID1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.