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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85119 Canola plastid 86.63 85.84
CDX77492 Canola plastid 86.32 85.54
Bra014968.1-P Field mustard plastid 86.02 85.24
Bra028326.1-P Field mustard plastid 76.29 83.39
CDY18104 Canola cytosol 68.69 79.86
AT5G19040.1 Thale cress mitochondrion 55.32 55.15
VIT_05s0020g02630.t01 Wine grape cytosol 50.76 50.61
HORVU5Hr1G110100.1 Barley mitochondrion 43.47 47.35
GSMUA_AchrUn_... Banana cytosol 40.73 46.85
AT3G63110.1 Thale cress plastid 46.5 45.54
KRH02126 Soybean plastid 45.29 43.82
KRH51017 Soybean plastid 44.68 43.75
PGSC0003DMT400083203 Potato cytosol 43.47 43.33
KRH11376 Soybean extracellular 44.98 43.27
Solyc01g080150.2.1 Tomato cytosol, extracellular, mitochondrion, plastid 42.86 42.86
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 37.99 42.66
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 37.99 42.66
Zm00001d034584_P001 Maize plastid 42.55 42.55
TraesCS5A01G181100.1 Wheat mitochondrion 37.69 42.47
OQU90772 Sorghum plastid 43.16 41.76
Zm00001d013021_P001 Maize plastid 42.25 41.25
TraesCS5A01G460000.1 Wheat plastid 43.77 41.03
TraesCS5B01G469600.1 Wheat cytosol 43.47 40.74
TraesCS5D01G471100.1 Wheat cytosol 43.47 40.74
Zm00001d005239_P001 Maize plastid 41.95 39.77
Os03t0810100-01 Rice extracellular 42.55 39.22
Os07t0211700-00 Rice plastid 41.34 39.19
Zm00001d019171_P001 Maize plastid 43.16 39.01
TraesCS5D01G185500.1 Wheat plastid 37.99 38.94
Zm00001d040810_P001 Maize cytosol 41.64 38.92
Os03t0358900-00 Rice cytosol 38.6 38.72
Os05t0311801-00 Rice cytosol 40.12 38.71
EER96067 Sorghum plastid 42.55 38.67
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 37.69 38.63
Os03t0356900-01 Rice extracellular 37.99 38.46
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 37.39 37.73
KRH20915 Soybean cytosol 17.63 37.66
HORVU3Hr1G025950.1 Barley cytosol 39.51 37.57
EES02950 Sorghum cytosol 41.64 37.23
EES12063 Sorghum cytosol 38.3 37.06
TraesCS3A01G136200.1 Wheat mitochondrion 38.91 36.99
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 38.91 36.99
AT3G19160.1 Thale cress plastid 36.78 36.67
Zm00001d003869_P001 Maize cytosol 35.87 36.65
TraesCS3D01G137000.1 Wheat cytosol, plastid 38.91 36.57
AT4G24650.1 Thale cress cytosol 34.65 35.85
GSMUA_AchrUn_... Banana mitochondrion 37.69 35.53
AT1G68460.1 Thale cress plastid 37.39 34.45
TraesCS1B01G323900.1 Wheat plastid 28.88 33.93
AT1G25410.1 Thale cress plastid 34.95 33.63
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 38.6 32.4
TraesCS1A01G057000.1 Wheat cytosol 38.3 32.31
AT2G27760.1 Thale cress cytosol 32.52 22.96
AT5G20040.3 Thale cress mitochondrion 22.49 15.78
Protein Annotations
KEGG:00908+2.5.1.75Gene3D:1.10.287.890MapMan:11.4.1.1Gene3D:3.40.50.300EntrezGene:821943UniProt:A0A178V807
EMBL:AB061405EMBL:AB062613ProteinID:AEE76788.1EMBL:AK227296ArrayExpress:AT3G23630EnsemblPlantsGene:AT3G23630
RefSeq:AT3G23630TAIR:AT3G23630RefSeq:AT3G23630-TAIR-GEnsemblPlants:AT3G23630.1TAIR:AT3G23630.1Symbol:ATIPT7
EMBL:AY087990Unigene:At.8052ProteinID:BAB02782.1GO:GO:0000003GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0006400GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009653GO:GO:0009691GO:GO:0009824GO:GO:0009856
GO:GO:0009860GO:GO:0009987GO:GO:0016043GO:GO:0016049GO:GO:0016740GO:GO:0030154
GO:GO:0040007GO:GO:0052381GO:GO:0052622GO:GO:0052623InterPro:IPTRefSeq:NP_566735.1
ProteinID:OAP02016.1InterPro:P-loop_NTPasePFAM:PF01715PO:PO:0000084PO:PO:0000230PO:PO:0001017
PO:PO:0007611PO:PO:0009005PO:PO:0009046PO:PO:0009047PO:PO:0025195PANTHER:PTHR11088
PANTHER:PTHR11088:SF49UniProt:Q94ID1SUPFAM:SSF52540UniParc:UPI0000048762SEG:seg:
Description
IPT7Adenylate isopentenyltransferase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94ID1]
Coordinates
chr3:+:8488695..8490266
Molecular Weight (calculated)
36981.7 Da
IEP (calculated)
9.891
GRAVY (calculated)
-0.303
Length
329 amino acids
Sequence
(BLAST)
001: MKFSISSLKQ VQPILCFKNK LSKVNVNSFL HPKEKVIFVM GATGSGKSRL AIDLATRFQG EIINSDKIQL YKGLDVLTNK VTPKECRGVP HHLLGVFDSE
101: AGNLTATQYS RLASQAISKL SANNKLPIVA GGSNSYIEAL VNHSSGFLLN NYDCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVF NPKANYSVGI
201: RRAIGVPELH EYLRNESLVD RATKSKMLDV AVKNIKKNTE ILACRQLKKI QRLHKKWKMS MHRVDATEVF LKRNVEEQDE AWENLVARPS ERIVDKFYNN
301: NNQLKNDDVE HCLAASYGGG SGSRAHNMI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.