Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30532 | Canola | cytosol | 78.76 | 79.09 |
| Bra034366.1-P | Field mustard | cytosol | 77.9 | 78.4 |
| VIT_06s0061g01410.t01 | Wine grape | nucleus | 57.51 | 56.54 |
| PGSC0003DMT400068271 | Potato | cytosol | 45.49 | 55.94 |
| Solyc11g066960.1.1 | Tomato | cytosol | 55.36 | 55.25 |
| KRH30498 | Soybean | cytosol | 54.51 | 53.14 |
| GSMUA_Achr11P... | Banana | cytosol | 47.0 | 52.14 |
| CDX77133 | Canola | plastid | 78.97 | 51.83 |
| Os01t0968700-01 | Rice | cytosol | 48.93 | 49.35 |
| TraesCS2B01G276300.2 | Wheat | plastid | 49.14 | 49.14 |
| TraesCS2D01G258000.3 | Wheat | plastid | 48.93 | 48.93 |
| KRH25178 | Soybean | cytosol | 31.33 | 48.51 |
| HORVU2Hr1G062320.8 | Barley | plastid | 49.36 | 48.22 |
| TraesCS2A01G265700.1 | Wheat | plastid | 44.42 | 47.92 |
| Zm00001d041982_P001 | Maize | plastid | 47.85 | 47.45 |
| EES02135 | Sorghum | cytosol, plastid | 47.42 | 47.12 |
| HORVU2Hr1G061960.1 | Barley | cytosol | 18.67 | 41.83 |
| HORVU2Hr1G061970.1 | Barley | cytosol | 18.67 | 41.83 |
| AT5G19040.1 | Thale cress | mitochondrion | 24.89 | 35.15 |
| AT3G23630.1 | Thale cress | mitochondrion, plastid | 22.96 | 32.52 |
| AT4G24650.1 | Thale cress | cytosol | 22.1 | 32.39 |
| AT3G19160.1 | Thale cress | plastid | 21.67 | 30.61 |
| AT3G63110.1 | Thale cress | plastid | 21.46 | 29.76 |
| AT1G25410.1 | Thale cress | plastid | 21.03 | 28.66 |
| AT1G68460.1 | Thale cress | plastid | 21.89 | 28.57 |
| AT5G20040.3 | Thale cress | mitochondrion | 16.95 | 16.84 |
Protein Annotations
| KEGG:00908+2.5.1.75 | Gene3D:1.10.20.140 | Gene3D:1.10.287.890 | Gene3D:3.40.50.300 | MapMan:50.2.5 | EntrezGene:817322 |
| ProteinID:AAC73024.2 | EMBL:AB062609 | ProteinID:AEC08039.1 | EMBL:AF109376 | EMBL:AK221649 | ArrayExpress:AT2G27760 |
| EnsemblPlantsGene:AT2G27760 | RefSeq:AT2G27760 | TAIR:AT2G27760 | RefSeq:AT2G27760-TAIR-G | EnsemblPlants:AT2G27760.1 | TAIR:AT2G27760.1 |
| Symbol:ATIPT2 | EMBL:AY080847 | Unigene:At.10555 | EMBL:BT001906 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006400 | GO:GO:0008033 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009824 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0052381 | InterPro:IPP_transferase_euk | InterPro:IPT | HAMAP:MF_00185 | RefSeq:NP_565658.1 |
| InterPro:P-loop_NTPase | PFAM:PF01715 | PIRSF:PIRSF039110 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007130 | PO:PO:0007134 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11088 | PANTHER:PTHR11088:SF26 | UniProt:Q9ZUX7 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR00174 | UniParc:UPI000000BD37 | SEG:seg | : | : |
Description
IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
Coordinates
chr2:+:11824772..11827609
Molecular Weight (calculated)
53101.3 Da
IEP (calculated)
6.657
GRAVY (calculated)
-0.490
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.