Factsheet for HORVU2Hr1G062320.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G258000.3	Wheat	plastid	93.29	95.49
TraesCS2B01G276300.2	Wheat	plastid	92.87	95.06
TraesCS2A01G265700.1	Wheat	plastid	85.33	94.21
HORVU2Hr1G061960.1	Barley	cytosol	33.33	76.44
HORVU2Hr1G061970.1	Barley	cytosol	33.33	76.44
Os01t0968700-01	Rice	cytosol	72.96	75.32
EES02135	Sorghum	cytosol, plastid	71.7	72.92
Zm00001d041982_P001	Maize	plastid	71.07	72.13
GSMUA_Achr11P...	Banana	cytosol	55.35	62.86
KRH30498	Soybean	cytosol	49.9	49.79
AT2G27760.1	Thale cress	cytosol	48.22	49.36
Solyc11g066960.1.1	Tomato	cytosol	48.01	49.04
VIT_06s0061g01410.t01	Wine grape	nucleus	48.64	48.95
Bra034366.1-P	Field mustard	cytosol	46.96	48.38
PGSC0003DMT400068271	Potato	cytosol	38.36	48.28
CDY30532	Canola	cytosol	46.96	48.28
KRH25178	Soybean	cytosol	27.88	44.19
HORVU5Hr1G110100.1	Barley	mitochondrion	26.21	41.39
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	23.69	38.57
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	23.69	38.57
HORVU3Hr1G025950.1	Barley	cytosol	25.16	34.68
CDX77133	Canola	plastid	48.01	32.25
HORVU1Hr1G083530.2	Barley	plastid	23.69	30.13
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	24.53	29.85
HORVU0Hr1G006770.3	Barley	cytosol	15.51	26.62
HORVU7Hr1G120070.12	Barley	mitochondrion	19.92	19.55

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.30.160.60	Gene3D:3.40.50.300	MapMan:50.2.5	UniProt:A0A287I689
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:HORVU2Hr1G062320	EnsemblPlants:HORVU2Hr1G062320.8	InterPro:IPT	HAMAP:MF_00185	InterPro:P-loop_NTPase	PFAM:PF01715
PANTHER:PTHR11088	PANTHER:PTHR11088:SF26	SUPFAM:SSF52540	TIGRFAMs:TIGR00174	UniParc:UPI000B462747	SEG:seg

Description

No Description!

Coordinates

chrchr2H:+:419657547..419660257

Molecular Weight (calculated)

53592.5 Da

IEP (calculated)

7.058

GRAVY (calculated)

-0.506

Length

477 amino acids

Sequence
(BLAST)

001: KKTPLKSALE MPHLAAPASP PPAPNLMSDA REAASSSPPS ERGRRKAVVV VMGATGAGKS RLAVDLAGHF TGVEVVSADS MQVYRGLDVL TNKVSLHEQN
101: GVPHHLLSIV DPSVEFTCRD FRDHALPIIE DILDHGGLPV IVGGTNFYIQ ALVSPFLFED MSEDMQGCTL SDQLDDIGLA TDDVRSGYEH LKEIDPIAAQ
201: RIHPNNHRKI NRYLELYATT GALPSDLFQG EAAEDKWGRP TSSRFDCCFL WVDAELHVLD NYVNERVDCM INAGLLDEVR NIYNPGAVYT QGLRQAIGVR
301: EFDEFFISYF TKKEPNNEMK AGMLDLHDDK LKNLLDEAVS QLKANTRRLV RRQRRRLHRL NKDFGWHLHH IDATEAFQCT TGDSWHVKVI KPCVDTVRRF
401: LSNDTSLASK DCSNDGGGTR LASRELWTQY VCEACDNRIL RGAHEWEQHK QGRGHRKRTQ RLKRKSKMKS TSSEAEV

Best Arabidopsis Sequence Match ( AT2G27760.1 )
(BLAST)

001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN

Arabidopsis Description

IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.