Factsheet for TraesCS2D01G258000.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G276300.2	Wheat	plastid	97.0	97.0
TraesCS2A01G265700.1	Wheat	plastid	89.06	96.06
HORVU2Hr1G062320.8	Barley	plastid	95.49	93.29
Os01t0968700-01	Rice	cytosol	74.89	75.54
HORVU2Hr1G061960.1	Barley	cytosol	33.05	74.04
HORVU2Hr1G061970.1	Barley	cytosol	33.05	74.04
EES02135	Sorghum	cytosol, plastid	73.82	73.35
Zm00001d041982_P001	Maize	plastid	73.82	73.19
GSMUA_Achr11P...	Banana	cytosol	56.01	62.14
KRH30498	Soybean	cytosol	50.86	49.58
Solyc11g066960.1.1	Tomato	cytosol	49.36	49.25
AT2G27760.1	Thale cress	cytosol	48.93	48.93
PGSC0003DMT400068271	Potato	cytosol	39.48	48.55
VIT_06s0061g01410.t01	Wine grape	nucleus	49.14	48.31
Bra034366.1-P	Field mustard	cytosol	47.85	48.16
CDY30532	Canola	cytosol	47.85	48.06
KRH25178	Soybean	cytosol	28.33	43.85
TraesCS5D01G471100.1	Wheat	cytosol	27.25	36.18
TraesCS3D01G137000.1	Wheat	cytosol, plastid	27.04	36.0
TraesCS5D01G185500.1	Wheat	plastid	24.25	35.2
CDX77133	Canola	plastid	48.71	31.97
TraesCS3D01G263000.1	Wheat	plastid	23.61	29.81
TraesCS1D01G383600.1	Wheat	plastid	24.03	28.57
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	20.6	21.15

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.30.160.60	Gene3D:3.40.50.300	MapMan:50.2.5	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009824	GO:GO:0009987	GO:GO:0016740	InterPro:IPT	HAMAP:MF_00185
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF26	SUPFAM:SSF52540	TIGRFAMs:TIGR00174
EnsemblPlantsGene:TraesCS2D01G258000	EnsemblPlants:TraesCS2D01G258000.3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:314078137..314080611

Molecular Weight (calculated)

52186.8 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.473

Length

466 amino acids

Sequence
(BLAST)

001: MPHLAAPASP PPAPNLMSDA REAASSSPPS ERGRRKAVVV VMGATGAGKS RLAVDLAGHF AGVEVVSADS MQVYRGLDVL TNKVSLDEQN GVPHHLLSIV
101: DPSVEFTCRH FRDHALPIIE DILDRGGLPV VVGGTNFYIQ ALVSPFLFED MSEDMQGCTL SDQLDDIGLA TDGVGSGYEH LKEIDPIAAQ RIHPNNHRKI
201: KRYLELYATT GALPSDLFQG EAAEDKWGRP TSSRFDCCFL WVDAELHVLD NYVNERVDCM INAGLLDEVR NIYNPGAVYT QGLRQAIGVR EFDEFFRLYF
301: TKKESDEIKA GMLNLHDDKL KSLLDEAVSQ LKANTRRLVR RQRRRLHRLN KDFGWNLHHI DATEAFQCTT GDSWHVKVIK PCADTVRRFL SNDTTLASKD
401: CSNDGGGTRL ASRELWTQYV CEACDNRVLR GAHEWEQHKQ GRGHRRRTQR LKRKSKIKST SSEAEV

Best Arabidopsis Sequence Match ( AT2G27760.1 )
(BLAST)

001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN

Arabidopsis Description

IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.