Factsheet for TraesCS2A01G265700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G258000.3	Wheat	plastid	96.06	89.06
TraesCS2B01G276300.2	Wheat	plastid	93.98	87.12
HORVU2Hr1G062320.8	Barley	plastid	94.21	85.33
Os01t0968700-01	Rice	cytosol	72.69	67.97
EES02135	Sorghum	cytosol, plastid	72.45	66.74
Zm00001d041982_P001	Maize	plastid	71.76	65.96
HORVU2Hr1G061960.1	Barley	cytosol	29.17	60.58
HORVU2Hr1G061970.1	Barley	cytosol	29.17	60.58
GSMUA_Achr11P...	Banana	cytosol	55.79	57.38
KRH30498	Soybean	cytosol	49.54	44.77
AT2G27760.1	Thale cress	cytosol	47.92	44.42
Solyc11g066960.1.1	Tomato	cytosol	47.69	44.11
Bra034366.1-P	Field mustard	cytosol	46.99	43.84
CDY30532	Canola	cytosol	46.99	43.75
VIT_06s0061g01410.t01	Wine grape	nucleus	47.92	43.67
PGSC0003DMT400068271	Potato	cytosol	37.04	42.22
KRH25178	Soybean	cytosol	26.39	37.87
TraesCS5A01G181100.1	Wheat	mitochondrion	23.38	34.59
TraesCS5A01G460000.1	Wheat	plastid	25.93	31.91
TraesCS3A01G136200.1	Wheat	mitochondrion	25.23	31.5
CDX77133	Canola	plastid	47.45	28.87
TraesCS1A01G376300.1	Wheat	plastid	24.54	26.97
TraesCS1A01G057000.1	Wheat	cytosol	24.07	26.67
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	22.22	26.02
TraesCS7A01G560300.1	Wheat	mitochondrion	20.6	19.65

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.30.160.60	Gene3D:3.40.50.300	MapMan:50.2.5	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009824	GO:GO:0009987	GO:GO:0016740	InterPro:IPT	HAMAP:MF_00185
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF26	SUPFAM:SSF52540	TIGRFAMs:TIGR00174
EnsemblPlantsGene:TraesCS2A01G265700	EnsemblPlants:TraesCS2A01G265700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:422095733..422098432

Molecular Weight (calculated)

48302.1 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.468

Length

432 amino acids

Sequence
(BLAST)

001: MPHLAAPASP PPAPNLMSDA REAASSSPPS ERGRRKAVVV VMGATGAGKS RLAVDLARHF AGVEVVSADS MQVYRGLDVL TNKVSLDEQN GVPHHLLSIV
101: DPSVEFTCLH VHSEWPQIIE DILDRGGLPV VVGGTNFYIQ ALVSPFLFED MSEDMQGCTL SDQLDDIGLA TDDVRSGYEH LKEIDPIAAQ RIHPNNHRKI
201: KRYLELYATT GALPSDLFQG EAAEDKWGRP TSSRFDCCFL WVDAELHVLD NYVNERVDCM INAGLLDEVR NIYNPAGMLD LHDDKLKSLL DEAVSQLKAN
301: TRRLVRLQRR RLHQLNKDFG WNLHHIDATE AFQCTTGDSW HVKVIKPCAD TVRRFLSNDT TLASKDSTND GGGTRLASRE LWTQYVCEAC DNRVLRGAHE
401: WEQHKQGRGH RKRTQRLKRK SKIKSTSSEA EV

Best Arabidopsis Sequence Match ( AT2G27760.1 )
(BLAST)

001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN

Arabidopsis Description

IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.