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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g066960.1.1 Tomato cytosol 94.99 77.09
PGSC0003DMT400087375 Potato cytosol 11.08 50.6
PGSC0003DMT400086561 Potato cytosol 13.19 49.02
VIT_06s0061g01410.t01 Wine grape nucleus 60.69 48.52
PGSC0003DMT400097056 Potato mitochondrion 14.78 47.86
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 14.25 47.79
Bra034366.1-P Field mustard cytosol 57.78 47.3
CDY30532 Canola cytosol 57.78 47.2
AT2G27760.1 Thale cress cytosol 55.94 45.49
PGSC0003DMT400097535 Potato mitochondrion 20.84 45.4
PGSC0003DMT400088039 Potato cytosol 16.89 45.39
KRH30498 Soybean cytosol 56.99 45.19
PGSC0003DMT400091323 Potato cytosol 17.15 44.22
KRH25178 Soybean cytosol 35.09 44.19
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 19.53 44.05
PGSC0003DMT400088950 Potato cytosol 24.27 43.19
GSMUA_Achr11P... Banana cytosol 47.49 42.86
PGSC0003DMT400097181 Potato cytosol 24.01 42.72
PGSC0003DMT400097110 Potato cytosol 18.47 42.68
PGSC0003DMT400084902 Potato cytosol 19.53 42.05
PGSC0003DMT400091399 Potato cytosol 15.83 41.96
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 24.27 41.44
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 14.51 41.35
PGSC0003DMT400092830 Potato cytosol 17.15 40.88
HORVU2Hr1G061960.1 Barley cytosol 22.43 40.87
HORVU2Hr1G061970.1 Barley cytosol 22.43 40.87
Os01t0968700-01 Rice cytosol 49.34 40.48
PGSC0003DMT400092576 Potato cytosol 16.62 40.13
TraesCS2B01G276300.2 Wheat plastid 49.08 39.91
EES02135 Sorghum cytosol, plastid 49.34 39.87
PGSC0003DMT400088770 Potato cytosol 16.36 39.74
Zm00001d041982_P001 Maize plastid 49.08 39.57
TraesCS2D01G258000.3 Wheat plastid 48.55 39.48
PGSC0003DMT400085022 Potato cytosol 28.5 39.42
PGSC0003DMT400096405 Potato cytosol 17.15 39.16
HORVU2Hr1G062320.8 Barley plastid 48.28 38.36
PGSC0003DMT400087535 Potato cytosol 26.91 37.5
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 17.68 37.43
PGSC0003DMT400088552 Potato cytosol 18.21 37.3
TraesCS2A01G265700.1 Wheat plastid 42.22 37.04
PGSC0003DMT400002509 Potato mitochondrion 30.87 36.68
PGSC0003DMT400086959 Potato cytosol 7.65 35.8
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 18.21 35.03
PGSC0003DMT400015411 Potato cytosol 25.59 34.89
PGSC0003DMT400086264 Potato cytosol 25.86 34.88
PGSC0003DMT400090908 Potato cytosol 20.58 34.21
PGSC0003DMT400089640 Potato mitochondrion 22.69 33.33
PGSC0003DMT400093701 Potato cytosol 21.9 33.33
PGSC0003DMT400037749 Potato cytosol 24.54 32.86
PGSC0003DMT400088899 Potato cytosol 19.0 32.43
PGSC0003DMT400088320 Potato cytosol 11.61 32.12
PGSC0003DMT400090073 Potato cytosol 20.58 32.1
PGSC0003DMT400088851 Potato cytosol 20.05 31.8
PGSC0003DMT400083203 Potato cytosol 27.18 31.21
CDX77133 Canola plastid 58.31 31.13
PGSC0003DMT400089330 Potato cytosol 23.22 30.99
PGSC0003DMT400090406 Potato cytosol 26.12 30.56
PGSC0003DMT400087380 Potato cytosol 13.46 30.36
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 13.72 30.06
PGSC0003DMT400085031 Potato cytosol 10.03 29.01
PGSC0003DMT400091271 Potato cytosol 9.5 28.57
PGSC0003DMT400086709 Potato cytosol 18.47 27.45
PGSC0003DMT400092288 Potato cytosol 15.3 27.36
PGSC0003DMT400085014 Potato cytosol 16.09 27.23
PGSC0003DMT400093491 Potato cytosol 17.15 26.53
PGSC0003DMT400095880 Potato cytosol 9.23 26.32
PGSC0003DMT400097346 Potato cytosol 9.23 26.12
PGSC0003DMT400085869 Potato cytosol 23.22 24.93
PGSC0003DMT400090690 Potato cytosol 8.97 24.46
PGSC0003DMT400087085 Potato cytosol 19.0 24.16
PGSC0003DMT400090493 Potato cytosol 23.48 24.12
PGSC0003DMT400095385 Potato cytosol 26.12 24.03
PGSC0003DMT400087595 Potato cytosol 8.71 23.91
PGSC0003DMT400088765 Potato cytosol 18.47 23.73
PGSC0003DMT400086310 Potato cytosol 7.39 22.95
PGSC0003DMT400086337 Potato cytosol 17.41 22.3
PGSC0003DMT400093314 Potato cytosol 18.47 22.08
PGSC0003DMT400094882 Potato cytosol 11.87 20.0
PGSC0003DMT400093361 Potato cytosol 24.54 19.91
PGSC0003DMT400091817 Potato cytosol 7.65 19.08
PGSC0003DMT400039795 Potato mitochondrion 21.9 18.44
PGSC0003DMT400068836 Potato cytosol 9.5 18.0
PGSC0003DMT400096448 Potato cytosol 4.49 16.35
PGSC0003DMT400096037 Potato cytosol 4.22 15.84
PGSC0003DMT400090318 Potato cytosol 4.22 15.38
PGSC0003DMT400026622 Potato cytosol 12.66 14.5
PGSC0003DMT400095744 Potato cytosol 6.86 14.44
PGSC0003DMT400096524 Potato cytosol, nucleus 26.39 9.0
Protein Annotations
KEGG:00908+2.5.1.75Gene3D:1.10.20.140Gene3D:3.40.50.300MapMan:50.2.5GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005829GO:GO:0006139GO:GO:0008033GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009691GO:GO:0009824GO:GO:0009987GO:GO:0016740InterPro:IPT
UniProt:M1CIQ9HAMAP:MF_00185InterPro:P-loop_NTPasePFAM:PF01715EnsemblPlantsGene:PGSC0003DMG400026541PGSC:PGSC0003DMG400026541
EnsemblPlants:PGSC0003DMT400068271PANTHER:PTHR11088PANTHER:PTHR11088:SF26SUPFAM:SSF52540TIGRFAMs:TIGR00174UniParc:UPI000296773B
SEG:seg:::::
Description
TRNA isopentenylpyrophosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400026541]
Coordinates
chr11:-:39837581..39844817
Molecular Weight (calculated)
43373.7 Da
IEP (calculated)
5.171
GRAVY (calculated)
-0.418
Length
379 amino acids
Sequence
(BLAST)
001: MEIVEKLQNP NNGDEIKLNP TSNSKPKVVV IMGATGSGKS KLAIDLASHF PIEIINADSM QVYQGLDVLT NKVTPQEQKE VPHHLLGTIS PCVEFTAKDF
101: RDSTISMINE VWSRNRLPVI VGGTNYYIQA LVSPFLLDDS VEEAEINCLS DSQEDEQPDL EVELMSEDYD CAYNRLKDID PVAANRIHPN NGRKINQYLN
201: LYARFGVIPS KLLQEKTVEN WGQVDNSRYD FCFLCVNASL TTLDPFVDRR VDHMVDAGLL KEVLDIYTMN ADYTKGLRQA IGVREFEPFL RCYIMEHQKP
301: CSESHGQTLN DQILKQNIQH IVDSPDDNEW KALLTEAIQQ VKLNTRRLVR RQRRRLNRLQ MLYGWNIHYV DATKSIISM
Best Arabidopsis Sequence Match ( AT2G27760.1 )
(BLAST)
001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN
Arabidopsis Description
IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.