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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400088950 Potato cytosol 75.74 96.71
PGSC0003DMT400088851 Potato cytosol 83.09 94.56
PGSC0003DMT400092576 Potato cytosol 54.04 93.63
PGSC0003DMT400090908 Potato cytosol 78.31 93.42
PGSC0003DMT400091323 Potato cytosol 50.0 92.52
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 59.56 90.5
PGSC0003DMT400086959 Potato cytosol 26.84 90.12
PGSC0003DMT400092830 Potato cytosol 52.57 89.94
PGSC0003DMT400091271 Potato cytosol 41.54 89.68
PGSC0003DMT400086310 Potato cytosol 39.71 88.52
PGSC0003DMT400088320 Potato cytosol 44.12 87.59
PGSC0003DMT400084902 Potato cytosol 56.62 87.5
PGSC0003DMT400097056 Potato mitochondrion 37.5 87.18
PGSC0003DMT400097535 Potato mitochondrion 54.41 85.06
PGSC0003DMT400086264 Potato cytosol 87.87 85.05
PGSC0003DMT400089640 Potato mitochondrion 80.51 84.88
PGSC0003DMT400087375 Potato cytosol 25.74 84.34
PGSC0003DMT400093491 Potato cytosol 75.37 83.67
PGSC0003DMT400088770 Potato cytosol 47.79 83.33
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 68.01 83.33
PGSC0003DMT400097110 Potato cytosol 50.0 82.93
PGSC0003DMT400097181 Potato cytosol 63.6 81.22
PGSC0003DMT400091399 Potato cytosol 41.91 79.72
PGSC0003DMT400090073 Potato cytosol 70.22 78.6
PGSC0003DMT400088899 Potato cytosol 63.97 78.38
PGSC0003DMT400096405 Potato cytosol 47.79 78.31
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 31.62 76.11
PGSC0003DMT400086561 Potato cytosol 28.31 75.49
PGSC0003DMT400096448 Potato cytosol 28.68 75.0
PGSC0003DMT400088039 Potato cytosol 38.6 74.47
PGSC0003DMT400097346 Potato cytosol 36.4 73.88
PGSC0003DMT400096037 Potato cytosol 26.84 72.28
PGSC0003DMT400090406 Potato cytosol 85.29 71.6
PGSC0003DMT400093701 Potato cytosol 63.97 69.88
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 43.01 69.64
PGSC0003DMT400095880 Potato cytosol 33.82 69.17
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 50.0 69.04
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 33.46 68.42
PGSC0003DMT400087595 Potato cytosol 34.19 67.39
PGSC0003DMT400087085 Potato cytosol 73.16 66.78
PGSC0003DMT400090318 Potato cytosol 25.37 66.35
PGSC0003DMT400090690 Potato cytosol 33.82 66.19
PGSC0003DMT400091817 Potato cytosol 36.76 65.79
PGSC0003DMT400085022 Potato cytosol 65.44 64.96
PGSC0003DMT400088552 Potato cytosol 41.91 61.62
PGSC0003DMT400089330 Potato cytosol 64.34 61.62
PGSC0003DMT400085014 Potato cytosol 48.16 58.48
PGSC0003DMT400086337 Potato cytosol 62.13 57.09
PGSC0003DMT400095385 Potato cytosol 84.56 55.83
PGSC0003DMT400068836 Potato cytosol 38.24 52.0
PGSC0003DMT400094882 Potato cytosol 43.01 52.0
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 31.62 49.71
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 46.32 48.84
PGSC0003DMT400095744 Potato cytosol 31.62 47.78
PGSC0003DMT400090493 Potato cytosol 64.71 47.7
PGSC0003DMT400085869 Potato cytosol 61.76 47.59
PGSC0003DMT400086709 Potato cytosol 43.38 46.27
PGSC0003DMT400087380 Potato cytosol 27.94 45.24
PGSC0003DMT400092288 Potato cytosol 34.93 44.81
PGSC0003DMT400085031 Potato cytosol 20.59 42.75
PGSC0003DMT400093314 Potato cytosol 49.26 42.27
PGSC0003DMT400002509 Potato mitochondrion 47.79 40.75
HORVU5Hr1G110100.1 Barley mitochondrion 45.22 40.73
PGSC0003DMT400093361 Potato cytosol 68.01 39.61
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 42.65 39.59
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 42.65 39.59
PGSC0003DMT400037749 Potato cytosol 41.18 39.58
TraesCS5A01G181100.1 Wheat mitochondrion 42.28 39.38
PGSC0003DMT400088765 Potato cytosol 41.91 38.64
KRH46921 Soybean cytosol 41.18 38.23
PGSC0003DMT400083203 Potato cytosol 46.32 38.18
PGSC0003DMT400015411 Potato cytosol 38.97 38.13
Zm00001d034584_P001 Maize plastid 45.96 37.99
KRH01762 Soybean extracellular, golgi, vacuole 45.96 37.54
OQU90772 Sorghum plastid 46.32 37.06
Zm00001d005239_P001 Maize plastid 46.32 36.31
EER96067 Sorghum plastid 48.16 36.19
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 42.65 36.14
TraesCS5D01G185500.1 Wheat plastid 42.28 35.83
TraesCS5A01G460000.1 Wheat plastid 45.96 35.61
Zm00001d013021_P001 Maize plastid 44.12 35.61
TraesCS5B01G469600.1 Wheat cytosol 45.59 35.33
TraesCS5D01G471100.1 Wheat cytosol 45.22 35.04
Zm00001d019171_P001 Maize plastid 46.69 34.89
Os03t0810100-01 Rice extracellular 45.22 34.45
HORVU3Hr1G025950.1 Barley cytosol 43.75 34.39
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 43.38 34.1
Zm00001d040810_P001 Maize cytosol 44.12 34.09
Os03t0358900-00 Rice cytosol 40.81 33.84
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 40.44 33.74
Os03t0356900-01 Rice extracellular 40.07 33.54
EES02950 Sorghum cytosol 45.22 33.42
Zm00001d003869_P001 Maize cytosol 39.34 33.23
TraesCS3D01G137000.1 Wheat cytosol, plastid 42.65 33.14
Os07t0211700-00 Rice plastid 42.28 33.14
Os05t0311801-00 Rice cytosol 41.54 33.14
TraesCS3A01G136200.1 Wheat mitochondrion 41.18 32.37
EES12063 Sorghum cytosol 38.97 31.18
TraesCS1A01G057000.1 Wheat cytosol 40.81 28.46
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 40.81 28.32
TraesCS1B01G323900.1 Wheat plastid 27.94 27.14
PGSC0003DMT400068271 Potato cytosol 37.5 26.91
PGSC0003DMT400096524 Potato cytosol, nucleus 93.38 22.86
PGSC0003DMT400026622 Potato cytosol 24.63 20.24
PGSC0003DMT400039795 Potato mitochondrion 22.79 13.78
Protein Annotations
EnsemblPlants:PGSC0003DMT400087535EnsemblPlantsGene:PGSC0003DMG400037106Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75
PANTHER:PTHR11088PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400037106SUPFAM:SSF52540UniParc:UPI000294A323
UniProt:M1DE15MapMan:11.4.1.1::::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400037106]
Coordinates
chr1:+:13680788..13681846
Molecular Weight (calculated)
31200.5 Da
IEP (calculated)
5.253
GRAVY (calculated)
-0.279
Length
272 amino acids
Sequence
(BLAST)
001: MGATGTGKSR LSVDLATHFR GEIINSDKMQ VYKGLDIVTN KITHAEKQGV RHYLLGEIEP DSNFTAEDFC LKSNIYIETI LKAQCVPIIV GGSNSYIEKL
101: VEDPVFMFKH KYDGCFIWID VEQSVLNRRV DTRVDEMVNA GLVDEVRQIF IPDADYTKGI RLSIGVPEMA KYLREEKNID GDDESKKMIL QASISSIKRN
201: TRLLICNQLD KIQRLINEKM WSVHHFIATD VFKEDRVEVV DEAWRNTVLQ PCLDIVERFL KNDDHNISIE CT
Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)
001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR
Arabidopsis Description
IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.