Factsheet for PGSC0003DMT400039795

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g014190.1.1	Tomato	mitochondrion	96.44	96.66
VIT_19s0014g01630.t01	Wine grape	mitochondrion	64.89	73.74
KRH21996	Soybean	mitochondrion	67.33	67.63
CDY45111	Canola	plastid	31.78	65.0
CDX70907	Canola	plastid	64.22	62.42
CDX88863	Canola	plastid	64.22	62.42
Bra020081.1-P	Field mustard	plastid	64.22	62.28
Bra006535.1-P	Field mustard	plastid	64.0	62.2
GSMUA_Achr1P06960_001	Banana	cytosol	34.0	61.45
AT5G20040.3	Thale cress	mitochondrion	63.33	60.77
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	52.0	57.21
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	54.89	54.41
KXG36879	Sorghum	mitochondrion	53.56	54.16
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	54.22	53.98
TraesCS7A01G560300.1	Wheat	mitochondrion	54.22	53.86
HORVU7Hr1G120070.12	Barley	mitochondrion	55.11	51.03
OQU77179	Sorghum	mitochondrion	53.56	47.72
PGSC0003DMT400090456	Potato	cytosol, mitochondrion, plastid	8.22	32.74
PGSC0003DMT400087375	Potato	cytosol	6.0	32.53
PGSC0003DMT400086561	Potato	cytosol	7.33	32.35
PGSC0003DMT400088039	Potato	cytosol	9.78	31.21
PGSC0003DMT400097056	Potato	mitochondrion	8.0	30.77
PGSC0003DMT400094329	Potato	cytosol, mitochondrion, nucleus	8.89	30.08
PGSC0003DMT400085545	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	11.11	29.76
PGSC0003DMT400091323	Potato	cytosol	9.33	28.57
PGSC0003DMT400087380	Potato	cytosol	10.44	27.98
PGSC0003DMT400097110	Potato	cytosol	10.0	27.44
PGSC0003DMT400088950	Potato	cytosol	12.0	25.35
PGSC0003DMT400097181	Potato	cytosol	12.0	25.35
PGSC0003DMT400094689	Potato	cytosol, mitochondrion, peroxisome	12.44	25.23
PGSC0003DMT400091399	Potato	cytosol	8.0	25.17
PGSC0003DMT400097535	Potato	mitochondrion	9.56	24.71
PGSC0003DMT400092830	Potato	cytosol	8.67	24.53
PGSC0003DMT400085022	Potato	cytosol	14.44	23.72
PGSC0003DMT400096405	Potato	cytosol	8.67	23.49
PGSC0003DMT400084902	Potato	cytosol	9.11	23.3
PGSC0003DMT400088552	Potato	cytosol	9.56	23.24
PGSC0003DMT400091824	Potato	cytosol, mitochondrion, nucleus	9.11	22.91
PGSC0003DMT400087535	Potato	cytosol	13.78	22.79
PGSC0003DMT400015411	Potato	cytosol	14.0	22.66
PGSC0003DMT400037749	Potato	cytosol	14.22	22.61
PGSC0003DMT400093770	Potato	cytosol, mitochondrion, plastid	9.78	22.34
PGSC0003DMT400092576	Potato	cytosol	7.78	22.29
PGSC0003DMT400085031	Potato	cytosol	6.44	22.14
PGSC0003DMT400002509	Potato	mitochondrion	15.56	21.94
PGSC0003DMT400068271	Potato	cytosol	18.44	21.9
PGSC0003DMT400089640	Potato	mitochondrion	12.44	21.71
PGSC0003DMT400083203	Potato	cytosol	15.56	21.21
PGSC0003DMT400088770	Potato	cytosol	7.33	21.15
PGSC0003DMT400086264	Potato	cytosol	13.11	21.0
PGSC0003DMT400090406	Potato	cytosol	14.67	20.37
PGSC0003DMT400088899	Potato	cytosol	10.0	20.27
PGSC0003DMT400088851	Potato	cytosol	10.67	20.08
PGSC0003DMT400090908	Potato	cytosol	10.0	19.74
PGSC0003DMT400068919	Potato	cytosol, mitochondrion, nucleus	7.56	19.65
PGSC0003DMT400092288	Potato	cytosol	9.11	19.34
PGSC0003DMT400090073	Potato	cytosol	10.22	18.93
PGSC0003DMT400085014	Potato	cytosol	9.33	18.75
PGSC0003DMT400093701	Potato	cytosol	10.22	18.47
PGSC0003DMT400088320	Potato	cytosol	5.56	18.25
PGSC0003DMT400089330	Potato	cytosol	11.11	17.61
PGSC0003DMT400086709	Potato	cytosol	9.78	17.25
PGSC0003DMT400085869	Potato	cytosol	13.11	16.71
PGSC0003DMT400093491	Potato	cytosol	8.89	16.33
PGSC0003DMT400086959	Potato	cytosol	2.89	16.05
PGSC0003DMT400090493	Potato	cytosol	12.89	15.72
PGSC0003DMT400086310	Potato	cytosol	4.22	15.57
PGSC0003DMT400093314	Potato	cytosol	10.89	15.46
PGSC0003DMT400091271	Potato	cytosol	4.22	15.08
PGSC0003DMT400088765	Potato	cytosol	9.56	14.58
PGSC0003DMT400086337	Potato	cytosol	9.56	14.53
PGSC0003DMT400095385	Potato	cytosol	12.89	14.08
PGSC0003DMT400087085	Potato	cytosol	9.11	13.76
PGSC0003DMT400090690	Potato	cytosol	4.22	13.67
PGSC0003DMT400095880	Potato	cytosol	4.0	13.53
PGSC0003DMT400097346	Potato	cytosol	4.0	13.43
PGSC0003DMT400093361	Potato	cytosol	13.78	13.28
PGSC0003DMT400094882	Potato	cytosol	6.22	12.44
PGSC0003DMT400087595	Potato	cytosol	3.78	12.32
PGSC0003DMT400096037	Potato	cytosol	2.67	11.88
PGSC0003DMT400091817	Potato	cytosol	4.0	11.84
PGSC0003DMT400095744	Potato	cytosol	4.67	11.67
PGSC0003DMT400090318	Potato	cytosol	2.67	11.54
PGSC0003DMT400068836	Potato	cytosol	4.89	11.0
PGSC0003DMT400096448	Potato	cytosol	2.44	10.58
PGSC0003DMT400026622	Potato	cytosol	6.89	9.37
PGSC0003DMT400096524	Potato	cytosol, nucleus	13.33	5.4

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	EntrezGene:102605568	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:IPT	UniProt:M1B8T0
HAMAP:MF_00185	InterPro:P-loop_NTPase	PFAM:PF01715	EnsemblPlantsGene:PGSC0003DMG400015380	PGSC:PGSC0003DMG400015380	EnsemblPlants:PGSC0003DMT400039795
PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	SUPFAM:SSF52540	TIGRFAMs:TIGR00174	UniParc:UPI0002953360	RefSeq:XP_006358948.1

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400015380]

Coordinates

chr12:+:270734..277432

Molecular Weight (calculated)

50996.4 Da

IEP (calculated)

6.204

GRAVY (calculated)

-0.414

Length

450 amino acids

Sequence
(BLAST)

001: MISTVGTGGV RISSYLRLPY TVETLLRRRC RLFTSCSASS TKEKVIVISG PTGAGKSKLA LELAKRLNGE IISADSVQVY RGLDVGSAKP SFDERKEVVH
101: HLVDILHPSE DYSVGQFFED ARQTTRDILD RGRVPIVAGG TGLYLRWFIY GKPDVPKASR EIAAEVDSEL ASLQNDEEWN AAVQLLVKAG DPGAQSLPVN
201: DWYRLRRRLE IVKSTGSPPS AFEVPYDSFR EQLISGQIDA ADVKTSADKL QQNEIKDLDY DFLCYFLSTN RIDLYRSIDF RCEDMLLGAD GILSEAGWLL
301: DVGLLPNSNS ATRAIGYRQA MEYLLRCREN GGWSSAGDFY EFLSEFQKGS RNFAKRQMTW FRNEQIYEWI DASKPLEKVL SFICDSYNSQ DGHLQMPESL
401: RMRKDIRNHR QAAELKTYRT INRHFIGHED CVDVLDWIKK TYGQPTDSLC

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.