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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400086561 Potato cytosol 79.52 64.71
PGSC0003DMT400097056 Potato mitochondrion 81.93 58.12
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 75.9 55.75
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 83.13 51.88
PGSC0003DMT400088039 Potato cytosol 79.52 46.81
PGSC0003DMT400091323 Potato cytosol 81.93 46.26
PGSC0003DMT400091399 Potato cytosol 75.9 44.06
PGSC0003DMT400097110 Potato cytosol 79.52 40.24
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 79.52 39.29
PGSC0003DMT400084902 Potato cytosol 81.93 38.64
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 83.13 35.03
PGSC0003DMT400088552 Potato cytosol 75.9 34.05
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 69.88 33.53
PGSC0003DMT400085031 Potato cytosol 51.81 32.82
PGSC0003DMT400088950 Potato cytosol 83.13 32.39
PGSC0003DMT400097181 Potato cytosol 83.13 32.39
PGSC0003DMT400087380 Potato cytosol 61.45 30.36
PGSC0003DMT400092288 Potato cytosol 77.11 30.19
PGSC0003DMT400092576 Potato cytosol 54.22 28.66
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 75.9 28.38
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 56.63 26.26
PGSC0003DMT400086709 Potato cytosol 79.52 25.88
PGSC0003DMT400097535 Potato mitochondrion 54.22 25.86
PGSC0003DMT400087535 Potato cytosol 84.34 25.74
PGSC0003DMT400088770 Potato cytosol 48.19 25.64
PGSC0003DMT400088765 Potato cytosol 85.54 24.07
PGSC0003DMT400089330 Potato cytosol 77.11 22.54
PGSC0003DMT400096405 Potato cytosol 44.58 22.29
PGSC0003DMT400086264 Potato cytosol 74.7 22.06
PGSC0003DMT400089640 Potato mitochondrion 67.47 21.71
PGSC0003DMT400088899 Potato cytosol 56.63 21.17
PGSC0003DMT400085022 Potato cytosol 69.88 21.17
PGSC0003DMT400093314 Potato cytosol 80.72 21.14
PGSC0003DMT400026622 Potato cytosol 74.7 18.73
PGSC0003DMT400090073 Potato cytosol 54.22 18.52
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 56.63 18.22
PGSC0003DMT400090908 Potato cytosol 49.4 17.98
PGSC0003DMT400090493 Potato cytosol 79.52 17.89
PGSC0003DMT400093701 Potato cytosol 53.01 17.67
PGSC0003DMT400092830 Potato cytosol 32.53 16.98
PGSC0003DMT400095385 Potato cytosol 79.52 16.02
PGSC0003DMT400088851 Potato cytosol 45.78 15.9
PGSC0003DMT400090406 Potato cytosol 61.45 15.74
PGSC0003DMT400015411 Potato cytosol 51.81 15.47
PGSC0003DMT400085869 Potato cytosol 65.06 15.3
PGSC0003DMT400085014 Potato cytosol 40.96 15.18
PGSC0003DMT400093361 Potato cytosol 81.93 14.56
PGSC0003DMT400086337 Potato cytosol 50.6 14.19
PGSC0003DMT400037749 Potato cytosol 48.19 14.13
HORVU5Hr1G110100.1 Barley mitochondrion 50.6 13.91
PGSC0003DMT400087085 Potato cytosol 49.4 13.76
PGSC0003DMT400093491 Potato cytosol 39.76 13.47
TraesCS5A01G181100.1 Wheat mitochondrion 46.99 13.36
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 46.99 13.31
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 46.99 13.31
PGSC0003DMT400002509 Potato mitochondrion 50.6 13.17
TraesCS1B01G323900.1 Wheat plastid 43.37 12.86
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 49.4 12.77
PGSC0003DMT400083203 Potato cytosol 50.6 12.73
KRH46921 Soybean cytosol 44.58 12.63
OQU90772 Sorghum plastid 50.6 12.35
TraesCS5A01G460000.1 Wheat plastid 51.81 12.25
TraesCS5B01G469600.1 Wheat cytosol 51.81 12.25
Zm00001d034584_P001 Maize plastid 48.19 12.16
TraesCS5D01G185500.1 Wheat plastid 46.99 12.15
Os03t0810100-01 Rice extracellular 51.81 12.04
TraesCS5D01G471100.1 Wheat cytosol 50.6 11.97
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 46.99 11.96
Zm00001d005239_P001 Maize plastid 49.4 11.82
TraesCS3D01G137000.1 Wheat cytosol, plastid 49.4 11.71
KRH01762 Soybean extracellular, golgi, vacuole 46.99 11.71
EES02950 Sorghum cytosol 51.81 11.68
Zm00001d040810_P001 Maize cytosol 49.4 11.65
EER96067 Sorghum plastid 50.6 11.6
Zm00001d013021_P001 Maize plastid 46.99 11.57
Zm00001d019171_P001 Maize plastid 50.6 11.54
Os07t0211700-00 Rice plastid 48.19 11.53
Os05t0311801-00 Rice cytosol 46.99 11.44
Os03t0356900-01 Rice extracellular 44.58 11.38
HORVU3Hr1G025950.1 Barley cytosol 46.99 11.27
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 46.99 11.27
PGSC0003DMT400068271 Potato cytosol 50.6 11.08
Zm00001d003869_P001 Maize cytosol 42.17 10.87
TraesCS3A01G136200.1 Wheat mitochondrion 44.58 10.69
Os03t0358900-00 Rice cytosol 42.17 10.67
EES12063 Sorghum cytosol 43.37 10.59
TraesCS1A01G057000.1 Wheat cytosol 49.4 10.51
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 45.78 9.69
PGSC0003DMT400039795 Potato mitochondrion 32.53 6.0
PGSC0003DMT400096524 Potato cytosol, nucleus 79.52 5.94
PGSC0003DMT400094882 Potato cytosol 6.02 2.22
PGSC0003DMT400095744 Potato cytosol 4.82 2.22
PGSC0003DMT400068836 Potato cytosol 4.82 2.0
PGSC0003DMT400087595 Potato cytosol 1.2 0.72
PGSC0003DMT400090690 Potato cytosol 1.2 0.72
PGSC0003DMT400091817 Potato cytosol 1.2 0.66
PGSC0003DMT400086310 Potato cytosol 0.0 0.0
PGSC0003DMT400086959 Potato cytosol 0.0 0.0
PGSC0003DMT400088320 Potato cytosol 0.0 0.0
PGSC0003DMT400090318 Potato cytosol 0.0 0.0
PGSC0003DMT400091271 Potato cytosol 0.0 0.0
PGSC0003DMT400095880 Potato cytosol 0.0 0.0
PGSC0003DMT400096037 Potato cytosol 0.0 0.0
PGSC0003DMT400096448 Potato cytosol 0.0 0.0
PGSC0003DMT400097346 Potato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400087375EnsemblPlantsGene:PGSC0003DMG400036946Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:IPTKEGG:00908+2.5.1.75PANTHER:PTHR11088PFAM:PF01715
PGSC:PGSC0003DMG400036946UniParc:UPI0002955039UniProt:M1DDQ4MapMan:50.2.5::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400036946]
Coordinates
chr1:+:54731677..54732017
Molecular Weight (calculated)
9423.3 Da
IEP (calculated)
9.110
GRAVY (calculated)
-0.431
Length
83 amino acids
Sequence
(BLAST)
1: MGATGTGKSR LSVDLATHFR GEIINSNKMQ VYNGLDIVTN KITRAKKQGV RHYLQGEIEP DSEFKAEDFC HKSIVYIEFF LKT
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.