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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • vacuole 1
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, vacuole
BaCelLo:plastid
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400091271 Potato cytosol 44.86 86.51
PGSC0003DMT400097535 Potato mitochondrion 61.73 86.21
PGSC0003DMT400086310 Potato cytosol 43.21 86.07
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 62.14 84.36
PGSC0003DMT400086959 Potato cytosol 27.57 82.72
PGSC0003DMT400088899 Potato cytosol 74.9 81.98
PGSC0003DMT400088320 Potato cytosol 43.62 77.37
PGSC0003DMT400096448 Potato cytosol 31.69 74.04
PGSC0003DMT400096037 Potato cytosol 30.45 73.27
PGSC0003DMT400092576 Potato cytosol 46.5 71.97
PGSC0003DMT400087535 Potato cytosol 78.6 70.22
PGSC0003DMT400089640 Potato mitochondrion 73.25 68.99
PGSC0003DMT400088851 Potato cytosol 67.49 68.62
PGSC0003DMT400084902 Potato cytosol 49.38 68.18
PGSC0003DMT400097346 Potato cytosol 37.45 67.91
PGSC0003DMT400090908 Potato cytosol 63.37 67.54
PGSC0003DMT400086264 Potato cytosol 76.95 66.55
PGSC0003DMT400086561 Potato cytosol 27.57 65.69
PGSC0003DMT400090318 Potato cytosol 27.98 65.38
PGSC0003DMT400095880 Potato cytosol 35.39 64.66
PGSC0003DMT400090406 Potato cytosol 86.01 64.51
PGSC0003DMT400091817 Potato cytosol 40.33 64.47
PGSC0003DMT400087595 Potato cytosol 36.21 63.77
PGSC0003DMT400090690 Potato cytosol 36.21 63.31
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 57.61 63.06
PGSC0003DMT400088950 Potato cytosol 54.32 61.97
PGSC0003DMT400092830 Potato cytosol 39.51 60.38
PGSC0003DMT400097181 Potato cytosol 52.67 60.09
PGSC0003DMT400093491 Potato cytosol 59.26 58.78
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 26.34 56.64
PGSC0003DMT400093701 Potato cytosol 56.79 55.42
PGSC0003DMT400087375 Potato cytosol 18.52 54.22
PGSC0003DMT400068836 Potato cytosol 43.21 52.5
PGSC0003DMT400097110 Potato cytosol 34.16 50.61
PGSC0003DMT400096405 Potato cytosol 34.16 50.0
PGSC0003DMT400091323 Potato cytosol 30.04 49.66
PGSC0003DMT400095744 Potato cytosol 35.39 47.78
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 32.92 47.62
PGSC0003DMT400088552 Potato cytosol 36.21 47.57
PGSC0003DMT400088770 Potato cytosol 30.45 47.44
PGSC0003DMT400094882 Potato cytosol 43.21 46.67
PGSC0003DMT400088039 Potato cytosol 26.75 46.1
PGSC0003DMT400085022 Potato cytosol 50.21 44.53
PGSC0003DMT400087085 Potato cytosol 54.32 44.3
PGSC0003DMT400091399 Potato cytosol 24.28 41.26
PGSC0003DMT400089330 Potato cytosol 48.15 41.2
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 32.1 39.59
PGSC0003DMT400095385 Potato cytosol 67.08 39.56
PGSC0003DMT400086337 Potato cytosol 47.74 39.19
PGSC0003DMT400097056 Potato mitochondrion 18.52 38.46
PGSC0003DMT400087380 Potato cytosol 26.34 38.1
PGSC0003DMT400090493 Potato cytosol 57.61 37.94
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 20.58 37.59
PGSC0003DMT400085031 Potato cytosol 20.16 37.4
PGSC0003DMT400085869 Potato cytosol 51.85 35.69
PGSC0003DMT400088765 Potato cytosol 42.39 34.92
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 24.28 34.1
PGSC0003DMT400085014 Potato cytosol 31.28 33.93
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 35.8 33.72
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 38.27 31.74
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 38.27 31.74
PGSC0003DMT400002509 Potato mitochondrion 41.56 31.66
TraesCS5A01G181100.1 Wheat mitochondrion 37.86 31.51
PGSC0003DMT400086709 Potato cytosol 32.51 30.98
HORVU5Hr1G110100.1 Barley mitochondrion 38.27 30.79
PGSC0003DMT400093361 Potato cytosol 58.44 30.41
KRH46921 Soybean cytosol 35.8 29.69
PGSC0003DMT400092288 Potato cytosol 25.51 29.25
TraesCS5D01G185500.1 Wheat plastid 37.86 28.66
Zm00001d034584_P001 Maize plastid 38.68 28.57
OQU90772 Sorghum plastid 39.92 28.53
KRH01762 Soybean extracellular, golgi, vacuole 39.09 28.53
PGSC0003DMT400083203 Potato cytosol 38.68 28.48
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 37.45 28.35
Zm00001d013021_P001 Maize plastid 38.68 27.89
HORVU3Hr1G025950.1 Barley cytosol 39.51 27.75
Zm00001d005239_P001 Maize plastid 39.51 27.67
Zm00001d040810_P001 Maize cytosol 39.92 27.56
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 39.09 27.46
EER96067 Sorghum plastid 40.74 27.35
Os05t0311801-00 Rice cytosol 38.27 27.27
Os03t0358900-00 Rice cytosol 36.63 27.13
TraesCS5A01G460000.1 Wheat plastid 39.09 27.07
PGSC0003DMT400015411 Potato cytosol 30.86 26.98
EES02950 Sorghum cytosol 40.74 26.9
TraesCS3D01G137000.1 Wheat cytosol, plastid 38.68 26.86
Zm00001d003869_P001 Maize cytosol 35.39 26.71
PGSC0003DMT400037749 Potato cytosol 30.86 26.5
TraesCS5D01G471100.1 Wheat cytosol 38.27 26.5
Zm00001d019171_P001 Maize plastid 39.51 26.37
Os03t0810100-01 Rice extracellular 38.68 26.33
TraesCS3A01G136200.1 Wheat mitochondrion 37.45 26.3
TraesCS5B01G469600.1 Wheat cytosol 37.86 26.21
Os03t0356900-01 Rice extracellular 34.98 26.15
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 34.98 26.07
PGSC0003DMT400093314 Potato cytosol 32.92 25.24
EES12063 Sorghum cytosol 34.98 25.0
Os07t0211700-00 Rice plastid 34.98 24.5
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 35.8 22.19
TraesCS1A01G057000.1 Wheat cytosol 34.98 21.79
PGSC0003DMT400068271 Potato cytosol 32.1 20.58
PGSC0003DMT400026622 Potato cytosol 27.16 19.94
TraesCS1B01G323900.1 Wheat plastid 22.22 19.29
PGSC0003DMT400096524 Potato cytosol, nucleus 76.54 16.74
PGSC0003DMT400039795 Potato mitochondrion 18.93 10.22
Protein Annotations
EnsemblPlants:PGSC0003DMT400090073EnsemblPlantsGene:PGSC0003DMG400039644Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTKEGG:00908+2.5.1.75PANTHER:PTHR11088
PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400039644SEG:segUniParc:UPI000294A511UniProt:M1DJK5
MapMan:50.2.5:::::
Description
TRNA delta(2)-isopentenylpyrophosphate transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400039644]
Coordinates
chr00:+:22682432..22688194
Molecular Weight (calculated)
28206.0 Da
IEP (calculated)
6.891
GRAVY (calculated)
-0.472
Length
243 amino acids
Sequence
(BLAST)
001: MNTFINNNNK FNKKKVVFIM GATGTGNYRI SVDLATHFRR EIMNSDKMQI HKGLEIVTNK ITHADKQGVR HYLLGLVDEV RQIFIPDADY TKEQSVLNRR
101: VDTRVDEMVN AGLVDEVRQI IIPDEDYTKG IQLSIGVPEM AKYLMEEKNI DGDDESKKMI LQASISSIKR NTRILIYNQL DKIKRLINEK MWSVHHIIAT
201: DVFKEDRKEA VDEAWRNTVL QPCLDIVERF LKNDDHNISI ECT
Best Arabidopsis Sequence Match ( AT3G23630.1 )
(BLAST)
001: MKFSISSLKQ VQPILCFKNK LSKVNVNSFL HPKEKVIFVM GATGSGKSRL AIDLATRFQG EIINSDKIQL YKGLDVLTNK VTPKECRGVP HHLLGVFDSE
101: AGNLTATQYS RLASQAISKL SANNKLPIVA GGSNSYIEAL VNHSSGFLLN NYDCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVF NPKANYSVGI
201: RRAIGVPELH EYLRNESLVD RATKSKMLDV AVKNIKKNTE ILACRQLKKI QRLHKKWKMS MHRVDATEVF LKRNVEEQDE AWENLVARPS ERIVDKFYNN
301: NNQLKNDDVE HCLAASYGGG SGSRAHNMI
Arabidopsis Description
IPT7Adenylate isopentenyltransferase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94ID1]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.