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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:
  • plastid 2
  • nucleus 2
  • mitochondrion 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, secretory
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400097056 Potato mitochondrion 55.95 80.34
PGSC0003DMT400088039 Potato cytosol 67.26 80.14
PGSC0003DMT400087375 Potato cytosol 39.29 79.52
PGSC0003DMT400086561 Potato cytosol 47.62 78.43
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 52.38 77.88
PGSC0003DMT400097110 Potato cytosol 75.6 77.44
PGSC0003DMT400091399 Potato cytosol 61.31 72.03
PGSC0003DMT400091323 Potato cytosol 61.9 70.75
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 49.4 62.41
PGSC0003DMT400097181 Potato cytosol 77.98 61.5
PGSC0003DMT400096405 Potato cytosol 59.52 60.24
PGSC0003DMT400088770 Potato cytosol 54.17 58.33
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 67.26 57.36
PGSC0003DMT400088552 Potato cytosol 62.5 56.76
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 72.02 54.5
PGSC0003DMT400088950 Potato cytosol 69.05 54.46
PGSC0003DMT400086709 Potato cytosol 75.6 49.8
PGSC0003DMT400092288 Potato cytosol 62.5 49.53
PGSC0003DMT400092830 Potato cytosol 46.43 49.06
PGSC0003DMT400084902 Potato cytosol 50.6 48.3
PGSC0003DMT400097535 Potato mitochondrion 46.43 44.83
PGSC0003DMT400086264 Potato cytosol 72.62 43.42
PGSC0003DMT400087535 Potato cytosol 69.64 43.01
PGSC0003DMT400092576 Potato cytosol 38.69 41.4
PGSC0003DMT400090908 Potato cytosol 54.17 39.91
PGSC0003DMT400089330 Potato cytosol 65.48 38.73
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 38.69 37.57
PGSC0003DMT400088851 Potato cytosol 52.38 36.82
PGSC0003DMT400089640 Potato mitochondrion 55.36 36.05
PGSC0003DMT400085022 Potato cytosol 57.14 35.04
PGSC0003DMT400087380 Potato cytosol 34.52 34.52
PGSC0003DMT400090406 Potato cytosol 66.07 34.26
PGSC0003DMT400093314 Potato cytosol 63.69 33.75
PGSC0003DMT400085014 Potato cytosol 44.64 33.48
PGSC0003DMT400088899 Potato cytosol 44.05 33.33
PGSC0003DMT400085869 Potato cytosol 69.64 33.14
PGSC0003DMT400090073 Potato cytosol 47.62 32.92
PGSC0003DMT400093701 Potato cytosol 48.21 32.53
PGSC0003DMT400093491 Potato cytosol 47.02 32.24
PGSC0003DMT400085031 Potato cytosol 25.0 32.06
PGSC0003DMT400090493 Potato cytosol 69.64 31.71
PGSC0003DMT400088765 Potato cytosol 52.98 30.17
PGSC0003DMT400086337 Potato cytosol 52.98 30.07
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 45.83 29.84
PGSC0003DMT400087085 Potato cytosol 52.38 29.53
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 29.76 27.93
PGSC0003DMT400093361 Potato cytosol 75.6 27.19
PGSC0003DMT400095385 Potato cytosol 64.88 26.46
PGSC0003DMT400037749 Potato cytosol 42.26 25.09
KRH46921 Soybean cytosol 43.45 24.91
PGSC0003DMT400015411 Potato cytosol 41.07 24.82
PGSC0003DMT400002509 Potato mitochondrion 46.43 24.45
KRH01762 Soybean extracellular, golgi, vacuole 48.21 24.32
TraesCS5A01G181100.1 Wheat mitochondrion 42.26 24.32
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 42.26 24.23
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 42.26 24.23
HORVU5Hr1G110100.1 Barley mitochondrion 43.45 24.17
PGSC0003DMT400026622 Potato cytosol 47.02 23.87
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 43.45 22.74
PGSC0003DMT400083203 Potato cytosol 44.64 22.73
Zm00001d034584_P001 Maize plastid 43.45 22.19
TraesCS5D01G185500.1 Wheat plastid 42.26 22.12
OQU90772 Sorghum plastid 44.64 22.06
PGSC0003DMT400088320 Potato cytosol 17.86 21.9
Zm00001d003869_P001 Maize cytosol 41.67 21.74
Os03t0356900-01 Rice extracellular 41.67 21.54
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 41.67 21.47
TraesCS5A01G460000.1 Wheat plastid 44.64 21.37
TraesCS5B01G469600.1 Wheat cytosol 44.64 21.37
TraesCS5D01G471100.1 Wheat cytosol 44.05 21.08
EER96067 Sorghum plastid 44.64 20.72
Zm00001d013021_P001 Maize plastid 41.07 20.47
Os07t0211700-00 Rice plastid 42.26 20.46
Zm00001d005239_P001 Maize plastid 42.26 20.46
Os03t0810100-01 Rice extracellular 43.45 20.45
Os03t0358900-00 Rice cytosol 39.88 20.43
TraesCS1B01G323900.1 Wheat plastid 33.93 20.36
HORVU3Hr1G025950.1 Barley cytosol 41.67 20.23
Zm00001d040810_P001 Maize cytosol 42.26 20.17
Zm00001d019171_P001 Maize plastid 43.45 20.05
EES12063 Sorghum cytosol 40.48 20.0
Os05t0311801-00 Rice cytosol 40.48 19.94
TraesCS3D01G137000.1 Wheat cytosol, plastid 41.07 19.71
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 40.48 19.65
PGSC0003DMT400068271 Potato cytosol 44.05 19.53
EES02950 Sorghum cytosol 42.26 19.29
TraesCS3A01G136200.1 Wheat mitochondrion 39.29 19.08
TraesCS1A01G057000.1 Wheat cytosol 42.26 18.21
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 40.48 17.35
PGSC0003DMT400094882 Potato cytosol 17.26 12.89
PGSC0003DMT400039795 Potato mitochondrion 29.76 11.11
PGSC0003DMT400096524 Potato cytosol, nucleus 66.67 10.08
PGSC0003DMT400086959 Potato cytosol 3.57 7.41
PGSC0003DMT400068836 Potato cytosol 4.17 3.5
PGSC0003DMT400091271 Potato cytosol 2.38 3.17
PGSC0003DMT400097346 Potato cytosol 1.79 2.24
PGSC0003DMT400095744 Potato cytosol 2.38 2.22
PGSC0003DMT400090690 Potato cytosol 1.79 2.16
PGSC0003DMT400086310 Potato cytosol 1.19 1.64
PGSC0003DMT400095880 Potato cytosol 1.19 1.5
PGSC0003DMT400087595 Potato cytosol 1.19 1.45
PGSC0003DMT400091817 Potato cytosol 1.19 1.32
PGSC0003DMT400096037 Potato cytosol 0.6 0.99
PGSC0003DMT400090318 Potato cytosol 0.6 0.96
PGSC0003DMT400096448 Potato cytosol 0.6 0.96
Protein Annotations
EnsemblPlants:PGSC0003DMT400085545EnsemblPlantsGene:PGSC0003DMG400035116Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75
PANTHER:PTHR11088PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400035116SEG:segSUPFAM:SSF52540
UniParc:UPI0002968B71UniProt:M1D9Q6MapMan:11.4.1.1:::
Description
Cytokinin biosynthetic isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400035116]
Coordinates
chr00:-:678997..681934
Molecular Weight (calculated)
19385.7 Da
IEP (calculated)
5.275
GRAVY (calculated)
0.069
Length
168 amino acids
Sequence
(BLAST)
001: MNTFINNNKF NKKKVVFIMG ATGTGKSRLL VDLATHFRGE IITSNKMQVY KGLDIMTNKI TQAEKLGVRL YLLGEIEPDS DFTAEDFCLM FIVYIANILK
101: TQCVPIIVGG SNYDIEKLVE EPMFMFEYKY DSCFIWIDVE HLVLNRRLDT RVDEMVNTGN FCSYLIYA
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.