Factsheet for PGSC0003DMT400096524

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088950	Potato	cytosol	18.09	94.37
PGSC0003DMT400087535	Potato	cytosol	22.86	93.38
PGSC0003DMT400090908	Potato	cytosol	19.08	92.98
PGSC0003DMT400086310	Potato	cytosol	10.08	91.8
PGSC0003DMT400092576	Potato	cytosol	12.96	91.72
PGSC0003DMT400091824	Potato	cytosol, mitochondrion, nucleus	14.76	91.62
PGSC0003DMT400091271	Potato	cytosol	10.35	91.27
PGSC0003DMT400088851	Potato	cytosol	19.44	90.38
PGSC0003DMT400086959	Potato	cytosol	6.57	90.12
PGSC0003DMT400091323	Potato	cytosol	11.88	89.8
PGSC0003DMT400088320	Potato	cytosol	10.98	89.05
PGSC0003DMT400092830	Potato	cytosol	12.69	88.68
PGSC0003DMT400084902	Potato	cytosol	13.77	86.93
PGSC0003DMT400097535	Potato	mitochondrion	13.14	83.91
PGSC0003DMT400086264	Potato	cytosol	20.97	82.92
PGSC0003DMT400094689	Potato	cytosol, mitochondrion, peroxisome	16.47	82.43
PGSC0003DMT400097056	Potato	mitochondrion	8.64	82.05
PGSC0003DMT400093491	Potato	cytosol	18.0	81.63
PGSC0003DMT400088770	Potato	cytosol	11.43	81.41
PGSC0003DMT400089640	Potato	mitochondrion	18.9	81.4
PGSC0003DMT400097181	Potato	cytosol	15.39	80.28
PGSC0003DMT400087375	Potato	cytosol	5.94	79.52
PGSC0003DMT400096448	Potato	cytosol	7.38	78.85
PGSC0003DMT400097110	Potato	cytosol	11.52	78.05
PGSC0003DMT400088899	Potato	cytosol	15.48	77.48
PGSC0003DMT400090073	Potato	cytosol	16.74	76.54
PGSC0003DMT400096405	Potato	cytosol	11.34	75.9
PGSC0003DMT400091399	Potato	cytosol	9.72	75.52
PGSC0003DMT400088039	Potato	cytosol	9.36	73.76
PGSC0003DMT400096037	Potato	cytosol	6.66	73.27
PGSC0003DMT400097346	Potato	cytosol	8.82	73.13
PGSC0003DMT400090456	Potato	cytosol, mitochondrion, plastid	7.29	71.68
PGSC0003DMT400093701	Potato	cytosol	15.84	70.68
PGSC0003DMT400086561	Potato	cytosol	6.48	70.59
PGSC0003DMT400095880	Potato	cytosol	8.37	69.92
PGSC0003DMT400090406	Potato	cytosol	20.25	69.44
PGSC0003DMT400087595	Potato	cytosol	8.46	68.12
PGSC0003DMT400093770	Potato	cytosol, mitochondrion, plastid	12.06	68.02
PGSC0003DMT400090318	Potato	cytosol	6.3	67.31
PGSC0003DMT400091817	Potato	cytosol	9.18	67.11
PGSC0003DMT400090690	Potato	cytosol	8.37	66.91
PGSC0003DMT400085545	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	10.08	66.67
PGSC0003DMT400094329	Potato	cytosol, mitochondrion, nucleus	7.65	63.91
PGSC0003DMT400085022	Potato	cytosol	15.66	63.5
PGSC0003DMT400087085	Potato	cytosol	16.92	63.09
PGSC0003DMT400089330	Potato	cytosol	15.84	61.97
PGSC0003DMT400085014	Potato	cytosol	11.88	58.93
PGSC0003DMT400088552	Potato	cytosol	9.81	58.92
PGSC0003DMT400086337	Potato	cytosol	14.85	55.74
PGSC0003DMT400095385	Potato	cytosol	20.43	55.1
PGSC0003DMT400068836	Potato	cytosol	9.63	53.5
PGSC0003DMT400094882	Potato	cytosol	10.44	51.56
PGSC0003DMT400095744	Potato	cytosol	7.83	48.33
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	11.07	47.67
PGSC0003DMT400090493	Potato	cytosol	15.66	47.15
PGSC0003DMT400085869	Potato	cytosol	14.94	47.03
PGSC0003DMT400068919	Potato	cytosol, mitochondrion, nucleus	7.29	46.82
PGSC0003DMT400086709	Potato	cytosol	10.17	44.31
PGSC0003DMT400087380	Potato	cytosol	6.66	44.05
PGSC0003DMT400092288	Potato	cytosol	8.1	42.45
PGSC0003DMT400093314	Potato	cytosol	12.06	42.27
PGSC0003DMT400085031	Potato	cytosol	4.95	41.98
PGSC0003DMT400002509	Potato	mitochondrion	11.7	40.75
HORVU5Hr1G110100.1	Barley	mitochondrion	10.8	39.74
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	10.26	38.91
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	10.26	38.91
TraesCS5A01G181100.1	Wheat	mitochondrion	10.17	38.7
PGSC0003DMT400088765	Potato	cytosol	10.26	38.64
PGSC0003DMT400037749	Potato	cytosol	9.81	38.52
PGSC0003DMT400093361	Potato	cytosol	16.11	38.33
PGSC0003DMT400015411	Potato	cytosol	9.45	37.77
KRH46921	Soybean	cytosol	9.9	37.54
Zm00001d034584_P001	Maize	plastid	10.98	37.08
KRH01762	Soybean	extracellular, golgi, vacuole	11.07	36.94
PGSC0003DMT400083203	Potato	cytosol	10.89	36.67
OQU90772	Sorghum	plastid	11.07	36.18
Zm00001d005239_P001	Maize	plastid	11.16	35.73
EER96067	Sorghum	plastid	11.61	35.64
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	10.26	35.51
TraesCS5D01G185500.1	Wheat	plastid	10.17	35.2
TraesCS5A01G460000.1	Wheat	plastid	10.98	34.76
Zm00001d013021_P001	Maize	plastid	10.53	34.72
TraesCS5B01G469600.1	Wheat	cytosol	10.89	34.47
TraesCS5D01G471100.1	Wheat	cytosol	10.8	34.19
HORVU3Hr1G025950.1	Barley	cytosol	10.62	34.1
Os03t0810100-01	Rice	extracellular	10.89	33.89
Zm00001d019171_P001	Maize	plastid	10.98	33.52
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	10.35	33.24
Os03t0358900-00	Rice	cytosol	9.81	33.23
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	9.72	33.13
Zm00001d040810_P001	Maize	cytosol	10.44	32.95
Os03t0356900-01	Rice	extracellular	9.63	32.92
Zm00001d003869_P001	Maize	cytosol	9.54	32.92
EES02950	Sorghum	cytosol	10.8	32.61
TraesCS3A01G136200.1	Wheat	mitochondrion	10.08	32.37
TraesCS3D01G137000.1	Wheat	cytosol, plastid	10.17	32.29
Os07t0211700-00	Rice	plastid	10.08	32.28
Os05t0311801-00	Rice	cytosol	9.9	32.26
EES12063	Sorghum	cytosol	9.45	30.88
TraesCS1A01G057000.1	Wheat	cytosol	9.81	27.95
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	9.81	27.81
PGSC0003DMT400068271	Potato	cytosol	9.0	26.39
TraesCS1B01G323900.1	Wheat	plastid	6.48	25.71
PGSC0003DMT400026622	Potato	cytosol	5.58	18.73
PGSC0003DMT400039795	Potato	mitochondrion	5.4	13.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400096524	EnsemblPlantsGene:PGSC0003DMG400046095	Gene3D:1.10.287.890	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase	KEGG:00908+2.5.1.75
ncoils:Coil	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	PFAM:PF01715	PGSC:PGSC0003DMG400046095	SEG:seg
SUPFAM:SSF52540	UniParc:UPI000295B358	UniProt:M1DYM6	MapMan:11.4.1.1	:	:

Description

Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400046095]

Coordinates

chr00:+:34182777..34186352

Molecular Weight (calculated)

31726.4 Da

IEP (calculated)

6.262

GRAVY (calculated)

-0.067

Length

1111 amino acids

Sequence
(BLAST)

0001: MGATGTGKSR LSVDLATHFR GEIINSDRMQ VYKGLEIVTN KITHAEKQGV RHYFLGEIEP DLNFTAEDFC LKCNIYIEIF LKAQCVPIIV GGSNSYIEKL
0101: VEDPVFMFKQ KYDGCFIWID VEQSVLNRRV DTRVDEMVNA GLVDEVRQIF IPDADYTKGI RLSIGVPEMA KYLREEKNID GDDESKKMIL QASISSIKRN
0201: TRILICNQLD KIQRLINEKM WSVHHIIATD VFKEDRKEVV DEAWRNTVLQ PCLDIVKRFL KNDDXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1101: XHFMKIFKND L

Best Arabidopsis Sequence Match ( AT3G23630.1 )
(BLAST)

001: MKFSISSLKQ VQPILCFKNK LSKVNVNSFL HPKEKVIFVM GATGSGKSRL AIDLATRFQG EIINSDKIQL YKGLDVLTNK VTPKECRGVP HHLLGVFDSE
101: AGNLTATQYS RLASQAISKL SANNKLPIVA GGSNSYIEAL VNHSSGFLLN NYDCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVF NPKANYSVGI
201: RRAIGVPELH EYLRNESLVD RATKSKMLDV AVKNIKKNTE ILACRQLKKI QRLHKKWKMS MHRVDATEVF LKRNVEEQDE AWENLVARPS ERIVDKFYNN
301: NNQLKNDDVE HCLAASYGGG SGSRAHNMI

Arabidopsis Description

IPT7Adenylate isopentenyltransferase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94ID1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.