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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400087375 Potato cytosol 21.14 80.72
PGSC0003DMT400097056 Potato mitochondrion 29.65 80.34
PGSC0003DMT400091323 Potato cytosol 36.28 78.23
PGSC0003DMT400085031 Potato cytosol 31.55 76.34
PGSC0003DMT400091399 Potato cytosol 32.81 72.73
PGSC0003DMT400088039 Potato cytosol 31.86 71.63
PGSC0003DMT400097110 Potato cytosol 35.65 68.9
PGSC0003DMT400086561 Potato cytosol 21.14 65.69
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 23.03 64.6
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 33.75 63.69
PGSC0003DMT400088770 Potato cytosol 30.28 61.54
PGSC0003DMT400088950 Potato cytosol 41.01 61.03
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 25.55 60.9
PGSC0003DMT400089330 Potato cytosol 53.94 60.21
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 37.22 59.9
PGSC0003DMT400097181 Potato cytosol 40.06 59.62
PGSC0003DMT400084902 Potato cytosol 30.28 54.55
PGSC0003DMT400096405 Potato cytosol 27.76 53.01
PGSC0003DMT400092830 Potato cytosol 26.5 52.83
PGSC0003DMT400088552 Potato cytosol 30.6 52.43
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 36.59 52.25
PGSC0003DMT400092576 Potato cytosol 24.61 49.68
PGSC0003DMT400087535 Potato cytosol 42.27 49.26
PGSC0003DMT400090908 Potato cytosol 34.07 47.37
PGSC0003DMT400090493 Potato cytosol 53.31 45.8
PGSC0003DMT400086264 Potato cytosol 40.06 45.2
PGSC0003DMT400093701 Potato cytosol 35.02 44.58
PGSC0003DMT400086709 Potato cytosol 35.33 43.92
PGSC0003DMT400088851 Potato cytosol 31.86 42.26
PGSC0003DMT400092288 Potato cytosol 28.08 41.98
PGSC0003DMT400097535 Potato mitochondrion 22.71 41.38
PGSC0003DMT400085014 Potato cytosol 27.44 38.84
PGSC0003DMT400085022 Potato cytosol 33.12 38.32
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 20.82 38.15
PGSC0003DMT400093491 Potato cytosol 29.34 37.96
PGSC0003DMT400089640 Potato mitochondrion 30.6 37.6
PGSC0003DMT400087380 Potato cytosol 19.87 37.5
PGSC0003DMT400086337 Potato cytosol 33.44 35.81
PGSC0003DMT400088899 Potato cytosol 24.61 35.14
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 19.56 34.64
PGSC0003DMT400087085 Potato cytosol 31.86 33.89
PGSC0003DMT400090406 Potato cytosol 34.38 33.64
PGSC0003DMT400090073 Potato cytosol 25.24 32.92
PGSC0003DMT400085869 Potato cytosol 36.59 32.86
PGSC0003DMT400095385 Potato cytosol 40.38 31.07
PGSC0003DMT400088320 Potato cytosol 13.25 30.66
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 24.61 30.23
PGSC0003DMT400088765 Potato cytosol 24.61 26.44
PGSC0003DMT400093361 Potato cytosol 38.8 26.34
PGSC0003DMT400002509 Potato mitochondrion 25.24 25.08
PGSC0003DMT400037749 Potato cytosol 22.08 24.73
HORVU5Hr1G110100.1 Barley mitochondrion 23.34 24.5
PGSC0003DMT400015411 Potato cytosol 21.45 24.46
PGSC0003DMT400083203 Potato cytosol 24.92 23.94
KRH46921 Soybean cytosol 22.08 23.89
TraesCS5A01G181100.1 Wheat mitochondrion 21.77 23.63
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 21.77 23.55
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 21.77 23.55
KRH01762 Soybean extracellular, golgi, vacuole 23.97 22.82
Zm00001d003869_P001 Maize cytosol 23.03 22.67
Zm00001d034584_P001 Maize plastid 23.34 22.49
Os03t0356900-01 Rice extracellular 23.03 22.46
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 22.4 22.12
Zm00001d005239_P001 Maize plastid 23.97 21.9
EER96067 Sorghum plastid 24.92 21.82
TraesCS5D01G185500.1 Wheat plastid 22.08 21.81
OQU90772 Sorghum plastid 23.34 21.76
TraesCS1B01G323900.1 Wheat plastid 18.93 21.43
HORVU3Hr1G025950.1 Barley cytosol 23.34 21.39
TraesCS5A01G460000.1 Wheat plastid 23.66 21.37
TraesCS5B01G469600.1 Wheat cytosol 23.66 21.37
Os03t0358900-00 Rice cytosol 22.08 21.34
Os03t0810100-01 Rice extracellular 23.97 21.29
TraesCS5D01G471100.1 Wheat cytosol 23.34 21.08
Zm00001d013021_P001 Maize plastid 22.4 21.07
EES12063 Sorghum cytosol 22.4 20.88
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 21.45 20.86
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 22.71 20.81
Os07t0211700-00 Rice plastid 22.71 20.75
Zm00001d019171_P001 Maize plastid 23.66 20.6
TraesCS3D01G137000.1 Wheat cytosol, plastid 22.71 20.57
Os05t0311801-00 Rice cytosol 22.08 20.53
TraesCS3A01G136200.1 Wheat mitochondrion 22.4 20.52
EES02950 Sorghum cytosol 23.66 20.38
Zm00001d040810_P001 Maize cytosol 22.4 20.17
PGSC0003DMT400094882 Potato cytosol 13.25 18.67
PGSC0003DMT400068271 Potato cytosol 22.08 18.47
PGSC0003DMT400026622 Potato cytosol 19.24 18.43
TraesCS1A01G057000.1 Wheat cytosol 22.08 17.95
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 21.45 17.35
PGSC0003DMT400086959 Potato cytosol 3.79 14.81
PGSC0003DMT400091271 Potato cytosol 5.36 13.49
PGSC0003DMT400086310 Potato cytosol 5.05 13.11
PGSC0003DMT400091817 Potato cytosol 5.99 12.5
PGSC0003DMT400096524 Potato cytosol, nucleus 42.27 12.06
PGSC0003DMT400068836 Potato cytosol 6.94 11.0
PGSC0003DMT400039795 Potato mitochondrion 15.46 10.89
PGSC0003DMT400087595 Potato cytosol 4.42 10.14
PGSC0003DMT400090318 Potato cytosol 3.15 9.62
PGSC0003DMT400096448 Potato cytosol 3.15 9.62
PGSC0003DMT400095880 Potato cytosol 3.79 9.02
PGSC0003DMT400097346 Potato cytosol 3.79 8.96
PGSC0003DMT400096037 Potato cytosol 2.84 8.91
PGSC0003DMT400095744 Potato cytosol 5.05 8.89
PGSC0003DMT400090690 Potato cytosol 3.15 7.19
Protein Annotations
EnsemblPlants:PGSC0003DMT400093314EnsemblPlantsGene:PGSC0003DMG400042885Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75PANTHER:PTHR11088
PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400042885SEG:segSUPFAM:SSF52540UniParc:UPI0002961F0D
UniProt:M1DRP3MapMan:50.2.5::::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400042885]
Coordinates
chr00:+:16318650..16325759
Molecular Weight (calculated)
35594.3 Da
IEP (calculated)
5.449
GRAVY (calculated)
0.037
Length
317 amino acids
Sequence
(BLAST)
001: MGETGTGKSS LSVDLATHFR GEIINSDKMQ VFKGLEIVTN KNTDAEKQGV RHYLLGEIEP DSKLTAEDLC LKSTVYIEFF LKTECVPIII GGKIEPDSNF
101: TAEDFCVKFI VYLEIFLKTE CVPIIVGGSN SYIEKLVEDH VFMFKYKYDS CFSGIDVEQS LLNHRVDTRV DEMVNAAKMN SFINNNNNKK VVFIMGATGM
201: GKSRLSVDLA TYFRGKIFNL DKVEVFKVLE IVTDKITHAE KQGVPHHLLG EIEPDSNFTA ENICLKSIVY IAIFLKTQCV PIIVGGSNSF IEKLVEDVVF
301: MFKYKVMRLG DGLTCPQ
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.