Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g061800.1.1 | Tomato | cytosol | 10.36 | 58.0 |
| Solyc08g061790.1.1 | Tomato | cytosol | 12.5 | 56.45 |
| Solyc11g027990.1.1 | Tomato | cytosol | 11.79 | 55.93 |
| Solyc11g063730.1.1 | Tomato | cytosol | 9.64 | 55.1 |
| Solyc11g019850.1.1 | Tomato | cytosol | 10.36 | 53.7 |
| Solyc11g019900.1.1 | Tomato | cytosol | 11.07 | 52.54 |
| Solyc11g063470.1.1 | Tomato | cytosol | 9.29 | 48.15 |
| Solyc11g061780.1.1 | Tomato | cytosol | 9.29 | 47.27 |
| TraesCS5B01G469600.1 | Wheat | cytosol | 55.36 | 44.16 |
| PGSC0003DMT400087375 | Potato | cytosol | 12.86 | 43.37 |
| PGSC0003DMT400097056 | Potato | mitochondrion | 17.86 | 42.73 |
| PGSC0003DMT400086561 | Potato | cytosol | 15.0 | 41.18 |
| PGSC0003DMT400090456 | Potato | cytosol, mitochondrion, plastid | 16.07 | 39.82 |
| PGSC0003DMT400091323 | Potato | cytosol | 20.71 | 39.46 |
| PGSC0003DMT400088039 | Potato | cytosol | 19.64 | 39.01 |
| Solyc11g061860.1.1 | Tomato | cytosol | 18.57 | 37.41 |
| Solyc11g020400.1.1 | Tomato | cytosol | 15.0 | 37.17 |
| PGSC0003DMT400094329 | Potato | cytosol, mitochondrion, nucleus | 17.5 | 36.84 |
| PGSC0003DMT400097110 | Potato | cytosol | 21.07 | 35.98 |
| PGSC0003DMT400091399 | Potato | cytosol | 18.21 | 35.66 |
| PGSC0003DMT400097181 | Potato | cytosol | 26.79 | 35.21 |
| PGSC0003DMT400085545 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 20.36 | 33.93 |
| Solyc11g019880.1.1 | Tomato | cytosol | 14.64 | 33.88 |
| PGSC0003DMT400088950 | Potato | cytosol | 25.71 | 33.8 |
| PGSC0003DMT400094689 | Potato | cytosol, mitochondrion, peroxisome | 26.43 | 33.33 |
| TraesCS5B01G178800.1 | Wheat | mitochondrion, plastid | 38.21 | 33.33 |
| VIT_08s0040g01010.t01 | Wine grape | cytosol, nucleus, plastid | 30.0 | 32.56 |
| PGSC0003DMT400096405 | Potato | cytosol | 18.93 | 31.93 |
| PGSC0003DMT400097535 | Potato | mitochondrion | 19.29 | 31.03 |
| AT5G19040.1 | Thale cress | mitochondrion | 36.43 | 30.91 |
| PGSC0003DMT400093770 | Potato | cytosol, mitochondrion, plastid | 21.43 | 30.46 |
| CDY02590 | Canola | cytosol | 36.07 | 30.24 |
| Bra023701.1-P | Field mustard | cytosol | 35.71 | 30.21 |
| CDY47191 | Canola | cytosol | 35.71 | 30.21 |
| PGSC0003DMT400085022 | Potato | cytosol | 29.29 | 29.93 |
| VIT_07s0104g00270.t01 | Wine grape | cytosol, mitochondrion, plastid | 34.29 | 29.91 |
| TraesCS1B01G074400.1 | Wheat | cytosol, mitochondrion, plastid | 34.64 | 29.75 |
| Bra002204.1-P | Field mustard | mitochondrion | 35.36 | 29.64 |
| CDX92563 | Canola | mitochondrion | 35.36 | 29.64 |
| CDY13945 | Canola | mitochondrion | 35.36 | 29.64 |
| PGSC0003DMT400088770 | Potato | cytosol | 16.43 | 29.49 |
| PGSC0003DMT400088552 | Potato | cytosol | 19.29 | 29.19 |
| KRH67172 | Soybean | plastid | 32.14 | 29.13 |
| PGSC0003DMT400092830 | Potato | cytosol | 16.43 | 28.93 |
| AT3G23630.1 | Thale cress | mitochondrion, plastid | 33.93 | 28.88 |
| PGSC0003DMT400002509 | Potato | mitochondrion | 32.86 | 28.84 |
| VIT_05s0020g02630.t01 | Wine grape | cytosol | 33.93 | 28.79 |
| Solyc09g064910.1.1 | Tomato | mitochondrion | 32.14 | 28.66 |
| TraesCS3B01G154100.1 | Wheat | cytosol, mitochondrion, plastid | 35.36 | 28.61 |
| CDX85119 | Canola | plastid | 33.57 | 28.31 |
| Bra040431.1-P | Field mustard | mitochondrion, plastid | 33.57 | 28.14 |
| CDX89173 | Canola | mitochondrion, plastid | 33.57 | 28.14 |
| CDX93935 | Canola | plastid | 33.57 | 28.14 |
| KRH71448 | Soybean | golgi, mitochondrion, plastid | 32.86 | 28.13 |
| KRG95498 | Soybean | mitochondrion | 31.07 | 28.06 |
| CDX77492 | Canola | plastid | 33.21 | 28.01 |
| AT3G63110.1 | Thale cress | plastid | 33.57 | 27.98 |
| PGSC0003DMT400087380 | Potato | cytosol | 16.79 | 27.98 |
| PGSC0003DMT400087535 | Potato | cytosol | 27.14 | 27.94 |
| Bra007728.1-P | Field mustard | plastid | 32.86 | 27.71 |
| Bra014968.1-P | Field mustard | plastid | 32.86 | 27.71 |
| CDY63340 | Canola | plastid | 32.86 | 27.71 |
| CDY67797 | Canola | mitochondrion | 32.86 | 27.71 |
| Solyc11g063740.1.1 | Tomato | cytosol | 20.0 | 27.45 |
| Solyc11g061890.1.1 | Tomato | cytosol | 12.14 | 27.42 |
| PGSC0003DMT400092576 | Potato | cytosol | 15.36 | 27.39 |
| PGSC0003DMT400084902 | Potato | cytosol | 17.14 | 27.27 |
| KRH51017 | Soybean | plastid | 32.5 | 27.08 |
| KRH02126 | Soybean | plastid | 32.86 | 27.06 |
| PGSC0003DMT400091824 | Potato | cytosol, mitochondrion, nucleus | 17.14 | 26.82 |
| VIT_09s0070g00710.t01 | Wine grape | mitochondrion | 29.64 | 26.77 |
| KRH11376 | Soybean | extracellular | 32.5 | 26.61 |
| Solyc11g061870.1.1 | Tomato | cytosol | 19.29 | 26.47 |
| Solyc11g063710.1.1 | Tomato | cytosol | 19.29 | 26.47 |
| PGSC0003DMT400086264 | Potato | cytosol | 26.43 | 26.33 |
| KRH31999 | Soybean | mitochondrion | 32.14 | 26.16 |
| KRH46921 | Soybean | cytosol | 27.14 | 25.94 |
| Solyc08g061680.1.1 | Tomato | cytosol, mitochondrion, nucleus | 18.93 | 25.85 |
| Solyc01g080150.2.1 | Tomato | cytosol, extracellular, mitochondrion, plastid | 30.36 | 25.84 |
| PGSC0003DMT400083203 | Potato | cytosol | 30.0 | 25.45 |
| Solyc11g019890.1.1 | Tomato | cytosol | 18.57 | 25.37 |
| PGSC0003DMT400088899 | Potato | cytosol | 20.0 | 25.23 |
| KRH01762 | Soybean | extracellular, golgi, vacuole | 29.64 | 24.92 |
| Solyc11g061830.1.1 | Tomato | cytosol | 17.86 | 24.51 |
| PGSC0003DMT400093701 | Potato | cytosol | 21.79 | 24.5 |
| Solyc11g061900.1.1 | Tomato | cytosol | 17.14 | 24.37 |
| PGSC0003DMT400068919 | Potato | cytosol, mitochondrion, nucleus | 15.0 | 24.28 |
| Solyc11g020380.1.1 | Tomato | cytosol | 17.14 | 24.24 |
| PGSC0003DMT400089640 | Potato | mitochondrion | 22.14 | 24.03 |
| Bra028326.1-P | Field mustard | plastid | 25.71 | 23.92 |
| Solyc11g061810.1.1 | Tomato | cytosol, mitochondrion, nucleus | 15.36 | 23.89 |
| PGSC0003DMT400090908 | Potato | cytosol | 19.29 | 23.68 |
| PGSC0003DMT400092288 | Potato | cytosol | 17.86 | 23.58 |
| PGSC0003DMT400086709 | Potato | cytosol | 21.07 | 23.14 |
| PGSC0003DMT400085031 | Potato | cytosol | 10.71 | 22.9 |
| PGSC0003DMT400089330 | Potato | cytosol | 23.21 | 22.89 |
| TraesCS3B01G296500.1 | Wheat | plastid | 29.64 | 22.8 |
| PGSC0003DMT400090073 | Potato | cytosol | 19.29 | 22.22 |
| TraesCS1B01G396700.1 | Wheat | plastid | 26.79 | 21.68 |
| PGSC0003DMT400090406 | Potato | cytosol | 25.0 | 21.6 |
| PGSC0003DMT400088851 | Potato | cytosol | 18.21 | 21.34 |
| Solyc08g061690.1.1 | Tomato | cytosol | 15.0 | 21.21 |
| CDY18104 | Canola | cytosol | 21.43 | 21.2 |
| PGSC0003DMT400085869 | Potato | cytosol | 25.36 | 20.11 |
| PGSC0003DMT400088765 | Potato | cytosol | 21.07 | 20.0 |
| PGSC0003DMT400085014 | Potato | cytosol | 15.71 | 19.64 |
| PGSC0003DMT400086337 | Potato | cytosol | 20.71 | 19.59 |
| Solyc11g063690.1.1 | Tomato | cytosol | 11.07 | 19.5 |
| PGSC0003DMT400093314 | Potato | cytosol | 21.43 | 18.93 |
| PGSC0003DMT400093491 | Potato | cytosol | 16.43 | 18.78 |
| KRH20915 | Soybean | cytosol | 10.0 | 18.18 |
| PGSC0003DMT400090493 | Potato | cytosol | 22.86 | 17.34 |
| PGSC0003DMT400086959 | Potato | cytosol | 5.0 | 17.28 |
| PGSC0003DMT400087085 | Potato | cytosol | 18.21 | 17.11 |
| Solyc11g019860.1.1 | Tomato | cytoskeleton, cytosol | 18.57 | 17.11 |
| PGSC0003DMT400095385 | Potato | cytosol | 25.0 | 16.99 |
| TraesCS2B01G276300.2 | Wheat | plastid | 28.21 | 16.95 |
| PGSC0003DMT400088320 | Potato | cytosol | 8.21 | 16.79 |
| PGSC0003DMT400091271 | Potato | cytosol | 7.5 | 16.67 |
| PGSC0003DMT400093361 | Potato | cytosol | 26.07 | 15.63 |
| PGSC0003DMT400097346 | Potato | cytosol | 6.79 | 14.18 |
| TraesCS7B01G486700.1 | Wheat | mitochondrion, plastid | 22.5 | 13.94 |
| PGSC0003DMT400094882 | Potato | cytosol | 11.07 | 13.78 |
| PGSC0003DMT400087595 | Potato | cytosol | 6.79 | 13.77 |
| PGSC0003DMT400090690 | Potato | cytosol | 6.79 | 13.67 |
| PGSC0003DMT400095880 | Potato | cytosol | 6.07 | 12.78 |
| PGSC0003DMT400026622 | Potato | cytosol | 13.93 | 11.78 |
| PGSC0003DMT400091817 | Potato | cytosol | 5.71 | 10.53 |
| PGSC0003DMT400068836 | Potato | cytosol | 7.14 | 10.0 |
| PGSC0003DMT400086310 | Potato | cytosol | 4.29 | 9.84 |
| PGSC0003DMT400095744 | Potato | cytosol | 5.36 | 8.33 |
| PGSC0003DMT400096524 | Potato | cytosol, nucleus | 25.71 | 6.48 |
| PGSC0003DMT400090318 | Potato | cytosol | 1.43 | 3.85 |
| PGSC0003DMT400096037 | Potato | cytosol | 1.07 | 2.97 |
| PGSC0003DMT400096448 | Potato | cytosol | 1.07 | 2.88 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G323900.1 | EnsemblPlantsGene:TraesCS1B01G323900 | Gene3D:3.40.50.300 | GO:GO:0006139 | GO:GO:0008033 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | InterPro:IPT | InterPro:P-loop_NTPase | KEGG:00908+2.5.1.75 | PANTHER:PTHR11088 |
| PANTHER:PTHR11088:SF41 | PFAM:PF01715 | SEG:seg | SUPFAM:SSF52540 | MapMan:50.2.5 | : |
Description
No Description!
Coordinates
chr1B:+:549374765..549375607
Molecular Weight (calculated)
30641.8 Da
IEP (calculated)
10.839
GRAVY (calculated)
-0.481
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNIPHSPAI HRRCSQPASD QASREPTMPM ISVAPPPALH FPRLTLTMPP PMITLPDRAH ADAPRPPPPL LLRHAAAKNK AVVAMGATAT GKSRLAIGLA
101: LRFGGEVINS DKIQAHAGLD VATNKVSPSE RAGVPHHLLG LDEDFCRKAA SAVRTALARG YVPVVAGGSS SYVEELVEGE RRAFRERYDF VARPVDDMCR
201: LSLVDEVAAA FDARRTDYSR GVWRAIGIPE LDACLRSTGA GRRGRAREHA HHRRRRDQGQ HVAPRVPPAR RDPGKYYQRK
101: LRFGGEVINS DKIQAHAGLD VATNKVSPSE RAGVPHHLLG LDEDFCRKAA SAVRTALARG YVPVVAGGSS SYVEELVEGE RRAFRERYDF VARPVDDMCR
201: LSLVDEVAAA FDARRTDYSR GVWRAIGIPE LDACLRSTGA GRRGRAREHA HHRRRRDQGQ HVAPRVPPAR RDPGKYYQRK
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.