Factsheet for Solyc11g019860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
peroxisome 1
plastid 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g061860.1.1	Tomato	cytosol	42.11	92.09
Solyc11g019880.1.1	Tomato	cytosol	36.51	91.74
Solyc11g019850.1.1	Tomato	cytosol	16.12	90.74
Solyc11g020400.1.1	Tomato	cytosol	32.89	88.5
Solyc11g063710.1.1	Tomato	cytosol	56.58	84.31
Solyc11g061800.1.1	Tomato	cytosol	13.82	84.0
Solyc11g063730.1.1	Tomato	cytosol	13.49	83.67
Solyc11g019890.1.1	Tomato	cytosol	56.25	83.41
Solyc11g061870.1.1	Tomato	cytosol	55.92	83.33
Solyc11g063740.1.1	Tomato	cytosol	55.92	83.33
Solyc11g061900.1.1	Tomato	cytosol	53.62	82.74
Solyc11g020380.1.1	Tomato	cytosol	53.62	82.32
Solyc11g061830.1.1	Tomato	cytosol	54.93	81.86
Solyc08g061790.1.1	Tomato	cytosol	16.45	80.65
Solyc11g063690.1.1	Tomato	cytosol	42.11	80.5
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	53.95	80.0
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	45.72	77.22
Solyc11g019900.1.1	Tomato	cytosol	14.8	76.27
Solyc11g027990.1.1	Tomato	cytosol	14.47	74.58
Solyc11g063470.1.1	Tomato	cytosol	12.83	72.22
Solyc11g061780.1.1	Tomato	cytosol	12.83	70.91
Solyc08g061690.1.1	Tomato	cytosol	43.42	66.67
Solyc11g061890.1.1	Tomato	cytosol	15.79	38.71
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	25.99	30.62
Solyc09g064910.1.1	Tomato	mitochondrion	30.26	29.3
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	27.63	28.67
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	27.63	28.67
TraesCS5D01G185500.1	Wheat	plastid	29.93	28.35
HORVU5Hr1G110100.1	Barley	mitochondrion	27.96	28.15
TraesCS5A01G181100.1	Wheat	mitochondrion	26.97	28.08
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	29.61	28.04
KRH01762	Soybean	extracellular, golgi, vacuole	30.26	27.63
KRH46921	Soybean	cytosol	25.66	26.62
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	28.62	26.44
OQU90772	Sorghum	plastid	28.95	25.88
Zm00001d034584_P001	Maize	plastid	27.3	25.23
TraesCS5A01G460000.1	Wheat	plastid	28.95	25.07
Zm00001d005239_P001	Maize	plastid	28.29	24.78
Zm00001d040810_P001	Maize	cytosol	28.62	24.72
Os05t0311801-00	Rice	cytosol	27.63	24.63
EER96067	Sorghum	plastid	29.28	24.59
HORVU3Hr1G025950.1	Barley	cytosol	27.96	24.57
TraesCS5D01G471100.1	Wheat	cytosol	28.29	24.5
TraesCS5B01G469600.1	Wheat	cytosol	28.29	24.5
Zm00001d013021_P001	Maize	plastid	26.97	24.33
Solyc05g009410.1.1	Tomato	cytosol	22.37	24.03
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	25.66	23.93
Os03t0358900-00	Rice	cytosol	25.66	23.78
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	26.97	23.7
Os03t0356900-01	Rice	extracellular	25.33	23.69
EES02950	Sorghum	cytosol	28.62	23.64
Zm00001d019171_P001	Maize	plastid	27.96	23.35
Os03t0810100-01	Rice	extracellular	27.3	23.25
TraesCS3D01G137000.1	Wheat	cytosol, plastid	26.64	23.14
TraesCS3A01G136200.1	Wheat	mitochondrion	26.32	23.12
Zm00001d003869_P001	Maize	cytosol	24.34	22.98
EES12063	Sorghum	cytosol	24.67	22.06
Solyc04g007240.1.1	Tomato	plastid	23.36	21.85
Os07t0211700-00	Rice	plastid	24.67	21.61
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	26.64	20.66
TraesCS1A01G057000.1	Wheat	cytosol	26.32	20.51
TraesCS1B01G323900.1	Wheat	plastid	17.11	18.57
Solyc11g066960.1.1	Tomato	cytosol	25.66	16.7
Solyc12g014190.1.1	Tomato	mitochondrion	15.13	10.24

Protein Annotations

KEGG:00908+2.5.1.27	KEGG:00908+2.5.1.75	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0003674	GO:GO:0003824
GO:GO:0004161	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	InterPro:IPT	UniProt:K4D6T9	InterPro:P-loop_NTPase
PFAM:PF01715	PFAM:PF01745	PANTHER:PTHR11088	PANTHER:PTHR11088:SF25	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g019860.1
EnsemblPlants:Solyc11g019860.1.1	InterPro:Tzs	UniParc:UPI000276AA83	:	:	:

Description

No Description!

Coordinates

chr11:+:9696688..9699080

Molecular Weight (calculated)

34679.7 Da

IEP (calculated)

7.323

GRAVY (calculated)

-0.439

Length

304 amino acids

Sequence
(BLAST)

001: MGATGTGKSH LSVDIATHFR GEIINSDKIQ VYKGLEIVTN KITHAEKQGV RHYLLGLVDE VRQIFIPDAY YTKGIRRSIS VPEMDKYFRE QTNIDGDDDS
101: KNMILQASIS SIKKMNTFIN NEEFNKKKVI FIMGATGTGK SRLSVDIATH FRGEIINSDK MQVYKELEIV TNKITHAEKQ GVRHYLLGLV DEVRQIFILD
201: ADYTKGIRRS IGVPKRDKYL REETNIDGDD ESKNMILQAS ISSIKRNTRM LICNQLDKIQ RLISEKIWSV HHIIATDVFK EDKEEDTDEA WTNTVLQPCL
301: DIVX

Best Arabidopsis Sequence Match ( AT3G23630.1 )
(BLAST)

001: MKFSISSLKQ VQPILCFKNK LSKVNVNSFL HPKEKVIFVM GATGSGKSRL AIDLATRFQG EIINSDKIQL YKGLDVLTNK VTPKECRGVP HHLLGVFDSE
101: AGNLTATQYS RLASQAISKL SANNKLPIVA GGSNSYIEAL VNHSSGFLLN NYDCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVF NPKANYSVGI
201: RRAIGVPELH EYLRNESLVD RATKSKMLDV AVKNIKKNTE ILACRQLKKI QRLHKKWKMS MHRVDATEVF LKRNVEEQDE AWENLVARPS ERIVDKFYNN
301: NNQLKNDDVE HCLAASYGGG SGSRAHNMI

Arabidopsis Description

IPT7Adenylate isopentenyltransferase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94ID1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.