Factsheet for Solyc08g061790.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g063730.1.1	Tomato	cytosol	62.9	79.59
Solyc11g061800.1.1	Tomato	cytosol	62.9	78.0
Solyc11g019900.1.1	Tomato	cytosol	70.97	74.58
Solyc11g019850.1.1	Tomato	cytosol	64.52	74.07
Solyc11g027990.1.1	Tomato	cytosol	67.74	71.19
Solyc11g063470.1.1	Tomato	cytosol	59.68	68.52
Solyc11g061780.1.1	Tomato	cytosol	59.68	67.27
Solyc11g020400.1.1	Tomato	cytosol	67.74	37.17
Solyc11g061860.1.1	Tomato	cytosol	82.26	36.69
Solyc11g019880.1.1	Tomato	cytosol	67.74	34.71
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	87.1	26.34
Solyc11g063740.1.1	Tomato	cytosol	80.65	24.51
Solyc11g061870.1.1	Tomato	cytosol	80.65	24.51
Solyc11g061830.1.1	Tomato	cytosol	79.03	24.02
Solyc11g019890.1.1	Tomato	cytosol	79.03	23.9
Solyc11g063710.1.1	Tomato	cytosol	77.42	23.53
Solyc11g061900.1.1	Tomato	cytosol	70.97	22.34
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	64.52	22.22
Solyc11g020380.1.1	Tomato	cytosol	62.9	19.7
Solyc08g061690.1.1	Tomato	cytosol	62.9	19.7
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	80.65	16.45
Solyc11g063690.1.1	Tomato	cytosol	40.32	15.72
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	58.06	13.95
Solyc05g009410.1.1	Tomato	cytosol	59.68	13.07
Solyc09g064910.1.1	Tomato	mitochondrion	66.13	13.06
HORVU5Hr1G110100.1	Barley	mitochondrion	61.29	12.58
TraesCS1B01G323900.1	Wheat	plastid	56.45	12.5
TraesCS5A01G181100.1	Wheat	mitochondrion	54.84	11.64
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	54.84	11.6
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	54.84	11.6
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	61.29	11.55
Zm00001d005239_P001	Maize	plastid	64.52	11.53
KRH46921	Soybean	cytosol	53.23	11.26
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	58.06	11.21
TraesCS5A01G460000.1	Wheat	plastid	62.9	11.11
Solyc04g007240.1.1	Tomato	plastid	58.06	11.08
OQU90772	Sorghum	plastid	59.68	10.88
TraesCS5D01G471100.1	Wheat	cytosol	61.29	10.83
TraesCS5B01G469600.1	Wheat	cytosol	61.29	10.83
EER96067	Sorghum	plastid	62.9	10.77
Zm00001d019171_P001	Maize	plastid	62.9	10.71
Zm00001d034584_P001	Maize	plastid	56.45	10.64
TraesCS5D01G185500.1	Wheat	plastid	54.84	10.59
Os03t0810100-01	Rice	extracellular	59.68	10.36
Os05t0311801-00	Rice	cytosol	56.45	10.26
KRH01762	Soybean	extracellular, golgi, vacuole	54.84	10.21
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	53.23	10.12
Zm00001d013021_P001	Maize	plastid	54.84	10.09
TraesCS3D01G137000.1	Wheat	cytosol, plastid	56.45	10.0
Os03t0356900-01	Rice	extracellular	51.61	9.85
TraesCS3A01G136200.1	Wheat	mitochondrion	54.84	9.83
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	54.84	9.83
HORVU3Hr1G025950.1	Barley	cytosol	54.84	9.83
Os07t0211700-00	Rice	plastid	54.84	9.8
Os03t0358900-00	Rice	cytosol	51.61	9.76
Zm00001d003869_P001	Maize	cytosol	50.0	9.63
EES02950	Sorghum	cytosol	56.45	9.51
Zm00001d040810_P001	Maize	cytosol	53.23	9.38
EES12063	Sorghum	cytosol	50.0	9.12
TraesCS1A01G057000.1	Wheat	cytosol	56.45	8.97
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	56.45	8.93
Solyc11g066960.1.1	Tomato	cytosol	58.06	7.71
Solyc12g014190.1.1	Tomato	mitochondrion	35.48	4.9
Solyc11g061890.1.1	Tomato	cytosol	9.68	4.84

Protein Annotations

EnsemblPlants:Solyc08g061790.1.1	EnsemblPlantsGene:Solyc08g061790.1	Gene3D:3.40.50.300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	PANTHER:PTHR11088
PANTHER:PTHR11088:SF25	UniParc:UPI000276AEB3	UniProt:K4CKW8	MapMan:50.2.5	:	:

Description

No Description!

Coordinates

chr8:+:49511339..49512086

Molecular Weight (calculated)

7136.8 Da

IEP (calculated)

9.070

GRAVY (calculated)

-0.213

Length

62 amino acids

Sequence
(BLAST)

1: MEATRMGKSR LSVDLATHFR GEIINSDKMQ LYKVLEIVTN KITHTEKHGV LHYLLGLVDE VR

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.