Factsheet for Solyc11g061800.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
cytosol 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, peroxisome, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g063730.1.1	Tomato	cytosol	80.0	81.63
Solyc11g061780.1.1	Tomato	cytosol	78.0	70.91
Solyc11g019850.1.1	Tomato	cytosol	76.0	70.37
Solyc11g063470.1.1	Tomato	cytosol	76.0	70.37
Solyc11g027990.1.1	Tomato	cytosol	80.0	67.8
Solyc08g061790.1.1	Tomato	cytosol	78.0	62.9
Solyc11g019900.1.1	Tomato	cytosol	74.0	62.71
Solyc11g020400.1.1	Tomato	cytosol	76.0	33.63
Solyc11g019880.1.1	Tomato	cytosol	78.0	32.23
Solyc11g061860.1.1	Tomato	cytosol	88.0	31.65
PGSC0003DMT400087380	Potato	cytosol	88.0	26.19
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	90.0	25.0
Solyc11g063740.1.1	Tomato	cytosol	88.0	21.57
Solyc11g061870.1.1	Tomato	cytosol	86.0	21.08
Solyc11g061900.1.1	Tomato	cytosol	82.0	20.81
Solyc11g061830.1.1	Tomato	cytosol	84.0	20.59
Solyc11g063710.1.1	Tomato	cytosol	84.0	20.59
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	82.0	20.0
Solyc11g019890.1.1	Tomato	cytosol	80.0	19.51
Solyc11g020380.1.1	Tomato	cytosol	76.0	19.19
Solyc08g061690.1.1	Tomato	cytosol	72.0	18.18
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	84.0	13.82
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	66.0	12.79
Solyc05g009410.1.1	Tomato	cytosol	68.0	12.01
Solyc11g063690.1.1	Tomato	cytosol	36.0	11.32
Solyc09g064910.1.1	Tomato	mitochondrion	70.0	11.15
HORVU5Hr1G110100.1	Barley	mitochondrion	66.0	10.93
Solyc04g007240.1.1	Tomato	plastid	68.0	10.46
TraesCS1B01G323900.1	Wheat	plastid	58.0	10.36
TraesCS5A01G460000.1	Wheat	plastid	68.0	9.69
TraesCS5A01G181100.1	Wheat	mitochondrion	56.0	9.59
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	56.0	9.56
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	56.0	9.56
KRH46921	Soybean	cytosol	56.0	9.56
TraesCS5B01G469600.1	Wheat	cytosol	66.0	9.4
TraesCS5D01G471100.1	Wheat	cytosol	66.0	9.4
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	60.0	9.35
KRH01762	Soybean	extracellular, golgi, vacuole	62.0	9.31
Zm00001d005239_P001	Maize	plastid	64.0	9.22
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	60.0	9.12
EER96067	Sorghum	plastid	66.0	9.12
OQU90772	Sorghum	plastid	60.0	8.82
Zm00001d034584_P001	Maize	plastid	58.0	8.81
TraesCS5D01G185500.1	Wheat	plastid	56.0	8.72
Os03t0810100-01	Rice	extracellular	62.0	8.68
Zm00001d019171_P001	Maize	plastid	62.0	8.52
Os05t0311801-00	Rice	cytosol	58.0	8.5
Os07t0211700-00	Rice	plastid	58.0	8.36
Zm00001d013021_P001	Maize	plastid	56.0	8.31
Os03t0356900-01	Rice	extracellular	54.0	8.31
Zm00001d040810_P001	Maize	cytosol	58.0	8.24
TraesCS3A01G136200.1	Wheat	mitochondrion	56.0	8.09
HORVU3Hr1G025950.1	Barley	cytosol	56.0	8.09
Zm00001d003869_P001	Maize	cytosol	52.0	8.07
TraesCS3D01G137000.1	Wheat	cytosol, plastid	56.0	8.0
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	52.0	7.98
Os03t0358900-00	Rice	cytosol	52.0	7.93
EES02950	Sorghum	cytosol	58.0	7.88
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	54.0	7.8
EES12063	Sorghum	cytosol	50.0	7.35
TraesCS1A01G057000.1	Wheat	cytosol	54.0	6.92
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	54.0	6.89
Solyc11g066960.1.1	Tomato	cytosol	58.0	6.21
Solyc12g014190.1.1	Tomato	mitochondrion	44.0	4.9
Solyc11g061890.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc11g061800.1.1	EnsemblPlantsGene:Solyc11g061800.1	Gene3D:3.40.50.300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	PANTHER:PTHR11088
UniParc:UPI00027693B2	UniProt:K4D8Z2	MapMan:50.2.5	:	:	:

Description

No Description!

Coordinates

chr11:+:48531723..48531875

Molecular Weight (calculated)

5487.6 Da

IEP (calculated)

10.022

GRAVY (calculated)

-0.302

Length

50 amino acids

Sequence
(BLAST)

1: MGAIGTGKSR VSVDLATHFR GEIINSDKMQ VYKGLEIITN KISHTERQGV

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.