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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • cytosol 2
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:mitochondrion, peroxisome, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0356900-01 Rice extracellular 74.39 75.08
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 62.8 63.19
Zm00001d003869_P001 Maize cytosol 61.89 63.04
EES12063 Sorghum cytosol 62.8 60.59
TraesCS5D01G185500.1 Wheat plastid 56.71 57.94
Solyc11g027990.1.1 Tomato cytosol 10.06 55.93
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 64.63 54.08
TraesCS1A01G057000.1 Wheat cytosol 63.11 53.08
Solyc11g063730.1.1 Tomato cytosol 7.93 53.06
Solyc11g061800.1.1 Tomato cytosol 7.93 52.0
Solyc08g061790.1.1 Tomato cytosol 9.76 51.61
Solyc11g019850.1.1 Tomato cytosol 8.23 50.0
Solyc11g019900.1.1 Tomato cytosol 8.84 49.15
Solyc11g061860.1.1 Tomato cytosol 19.82 46.76
Os05t0311801-00 Rice cytosol 47.87 46.04
Solyc11g061780.1.1 Tomato cytosol 7.62 45.45
Solyc11g019880.1.1 Tomato cytosol 16.46 44.63
Solyc11g063470.1.1 Tomato cytosol 7.32 44.44
GSMUA_Achr5P07950_001 Banana cytosol 45.12 44.31
Solyc11g020400.1.1 Tomato cytosol 14.94 43.36
PGSC0003DMT400085022 Potato cytosol 35.98 43.07
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 33.84 43.02
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 23.48 43.02
Os03t0810100-01 Rice extracellular 46.04 42.3
PGSC0003DMT400088950 Potato cytosol 27.44 42.25
PGSC0003DMT400091323 Potato cytosol 18.9 42.18
PGSC0003DMT400087375 Potato cytosol 10.67 42.17
PGSC0003DMT400086561 Potato cytosol 13.11 42.16
PGSC0003DMT400097535 Potato mitochondrion 22.26 41.95
PGSC0003DMT400097056 Potato mitochondrion 14.94 41.88
PGSC0003DMT400092576 Potato cytosol 19.82 41.4
Os07t0211700-00 Rice plastid 43.6 41.21
Solyc11g061870.1.1 Tomato cytosol 25.61 41.18
PGSC0003DMT400087535 Potato cytosol 33.84 40.81
AT5G19040.1 Thale cress mitochondrion 40.55 40.3
Solyc11g063710.1.1 Tomato cytosol 25.0 40.2
Solyc11g063740.1.1 Tomato cytosol 25.0 40.2
PGSC0003DMT400097181 Potato cytosol 25.91 39.91
Solyc11g020380.1.1 Tomato cytosol 24.09 39.9
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 20.43 39.88
PGSC0003DMT400088770 Potato cytosol 18.9 39.74
PGSC0003DMT400088039 Potato cytosol 17.07 39.72
VIT_05s0020g02630.t01 Wine grape cytosol 39.94 39.7
Solyc11g061900.1.1 Tomato cytosol 23.78 39.59
Bra023701.1-P Field mustard cytosol 39.94 39.58
CDY47191 Canola cytosol 39.94 39.58
CDY13945 Canola mitochondrion 40.24 39.52
PGSC0003DMT400086959 Potato cytosol 9.76 39.51
VIT_07s0104g00270.t01 Wine grape cytosol, mitochondrion, plastid 38.41 39.25
CDX92563 Canola mitochondrion 39.94 39.22
PGSC0003DMT400084902 Potato cytosol 21.04 39.2
PGSC0003DMT400090908 Potato cytosol 27.13 39.04
Solyc08g061680.1.1 Tomato cytosol, mitochondrion, nucleus 24.39 39.02
Solyc11g019890.1.1 Tomato cytosol 24.39 39.02
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 13.41 38.94
Bra002204.1-P Field mustard mitochondrion 39.63 38.92
CDY02590 Canola cytosol 39.63 38.92
PGSC0003DMT400091271 Potato cytosol 14.94 38.89
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 26.22 38.74
AT3G23630.1 Thale cress mitochondrion, plastid 38.72 38.6
PGSC0003DMT400091399 Potato cytosol 16.77 38.46
PGSC0003DMT400097110 Potato cytosol 19.21 38.41
PGSC0003DMT400092830 Potato cytosol 18.6 38.36
CDX77492 Canola plastid 38.72 38.25
Solyc11g061830.1.1 Tomato cytosol 23.78 38.24
PGSC0003DMT400086264 Potato cytosol 32.62 38.08
PGSC0003DMT400088320 Potato cytosol 15.85 37.96
Bra007728.1-P Field mustard plastid 38.41 37.95
Bra014968.1-P Field mustard plastid 38.41 37.95
CDY63340 Canola plastid 38.41 37.95
Solyc11g061890.1.1 Tomato cytosol 14.33 37.9
Solyc11g061810.1.1 Tomato cytosol, mitochondrion, nucleus 20.73 37.78
Solyc11g063690.1.1 Tomato cytosol 18.29 37.74
CDX85119 Canola plastid 38.11 37.65
CDY67797 Canola mitochondrion 38.11 37.65
KRH71448 Soybean golgi, mitochondrion, plastid 37.5 37.61
CDX93935 Canola plastid 38.11 37.43
PGSC0003DMT400096405 Potato cytosol 18.9 37.35
KRH46921 Soybean cytosol 33.23 37.2
KRG95498 Soybean mitochondrion 35.06 37.1
VIT_09s0070g00710.t01 Wine grape mitochondrion 35.06 37.1
KRH67172 Soybean plastid 34.76 36.89
Bra040431.1-P Field mustard mitochondrion, plastid 37.5 36.83
CDX89173 Canola mitochondrion, plastid 37.5 36.83
PGSC0003DMT400090073 Potato cytosol 27.13 36.63
Solyc09g064910.1.1 Tomato mitochondrion 35.06 36.62
PGSC0003DMT400088851 Potato cytosol 26.52 36.4
AT3G63110.1 Thale cress plastid 37.2 36.31
PGSC0003DMT400087595 Potato cytosol 15.24 36.23
GSMUA_Achr3P09080_001 Banana extracellular 36.89 36.23
KRH02126 Soybean plastid 37.5 36.18
PGSC0003DMT400083203 Potato cytosol 36.28 36.06
PGSC0003DMT400088899 Potato cytosol 24.39 36.04
KRH11376 Soybean extracellular 37.5 35.96
Solyc08g061690.1.1 Tomato cytosol 21.65 35.86
Bra028326.1-P Field mustard plastid 32.62 35.55
KRH31999 Soybean mitochondrion 37.2 35.47
KRH01762 Soybean extracellular, golgi, vacuole 35.98 35.44
KRH51017 Soybean plastid 36.28 35.42
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 14.33 35.34
Solyc01g080150.2.1 Tomato cytosol, extracellular, mitochondrion, plastid 35.37 35.26
PGSC0003DMT400086310 Potato cytosol 13.11 35.25
PGSC0003DMT400089640 Potato mitochondrion 27.44 34.88
PGSC0003DMT400002509 Potato mitochondrion 33.84 34.8
PGSC0003DMT400097346 Potato cytosol 14.02 34.33
PGSC0003DMT400090406 Potato cytosol 33.54 33.95
CDY18104 Canola cytosol 28.96 33.57
PGSC0003DMT400095880 Potato cytosol 13.41 33.08
PGSC0003DMT400093491 Potato cytosol 24.7 33.06
Os01t0688300-00 Rice mitochondrion 33.54 32.74
PGSC0003DMT400093701 Potato cytosol 24.7 32.53
KRH20915 Soybean cytosol 15.24 32.47
PGSC0003DMT400090690 Potato cytosol 13.72 32.37
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 19.21 31.98
PGSC0003DMT400088552 Potato cytosol 17.99 31.89
Os07t0190150-00 Rice cytosol 22.56 31.49
Os05t0551700-01 Rice mitochondrion 33.23 30.28
PGSC0003DMT400096037 Potato cytosol 9.15 29.7
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 15.55 29.48
PGSC0003DMT400089330 Potato cytosol 25.3 29.23
PGSC0003DMT400087380 Potato cytosol 14.94 29.17
PGSC0003DMT400090318 Potato cytosol 9.15 28.85
PGSC0003DMT400096448 Potato cytosol 9.15 28.85
PGSC0003DMT400085014 Potato cytosol 19.21 28.12
PGSC0003DMT400091817 Potato cytosol 12.5 26.97
PGSC0003DMT400086337 Potato cytosol 24.09 26.69
PGSC0003DMT400087085 Potato cytosol 24.09 26.51
PGSC0003DMT400094882 Potato cytosol 17.99 26.22
Solyc11g019860.1.1 Tomato cytoskeleton, cytosol 23.78 25.66
PGSC0003DMT400092288 Potato cytosol 15.85 24.53
PGSC0003DMT400068836 Potato cytosol 14.94 24.5
PGSC0003DMT400085869 Potato cytosol 26.22 24.36
PGSC0003DMT400086709 Potato cytosol 18.6 23.92
PGSC0003DMT400095385 Potato cytosol 29.88 23.79
Os01t0968700-01 Rice cytosol 32.32 22.94
PGSC0003DMT400095744 Potato cytosol 12.5 22.78
PGSC0003DMT400090493 Potato cytosol 25.3 22.49
PGSC0003DMT400085031 Potato cytosol 8.84 22.14
PGSC0003DMT400093314 Potato cytosol 21.34 22.08
PGSC0003DMT400088765 Potato cytosol 19.82 22.03
PGSC0003DMT400093361 Potato cytosol 28.66 20.13
PGSC0003DMT400026622 Potato cytosol 12.8 12.69
PGSC0003DMT400096524 Potato cytosol, nucleus 33.23 9.81
Protein Annotations
KEGG:00908+2.5.1.75Gene3D:1.10.287.890EntrezGene:107275347MapMan:11.4.1.1Gene3D:3.40.50.300ProteinID:ABF96060.1
ProteinID:BAS84267.1GO:GO:0003674GO:GO:0003824GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016740InterPro:IPTEnsemblPlantsGene:Os03g0358900EnsemblPlants:Os03t0358900-00
InterPro:P-loop_NTPasePFAM:PF01715PANTHER:PTHR11088PANTHER:PTHR11088:SF37UniProt:Q10L50SUPFAM:SSF52540
UniParc:UPI0000DB4DB8RefSeq:XP_015630309.1SEG:seg:::
Description
Similar to Isopentenyl transferase IPT2. (Os03t0358900-00)
Coordinates
chr3:-:13922782..13923768
Molecular Weight (calculated)
34479.0 Da
IEP (calculated)
5.116
GRAVY (calculated)
0.109
Length
328 amino acids
Sequence
(BLAST)
001: MEHCNGIAAV GRWLSTKPKV IFVLGATATG KSKLAIRLAA RFDGEVINSD KIQAHDGFPV ITNKVTDEER AGVAHHLLGG VSPDADFTAE DFRREAAAAV
101: ARVHAAGRLP VVAGGSNIYV EALVAGGGGA FLAAYDCLFL WTDVAPDLLR WYTAARVDDM VRRGLVGEAR AGFDAGADYT RGVRRAIGLP EMHGYLLAER
201: EGGAGAEDDD DLLAGMLEAA VREIKDNTFR LTVSQVAKIR RLSALPGWDV RRVDATAVVA RMAEGAPHGE TWREVVWEPC EEMVSRFLET PAAAAAVVAN
301: GKVDVNVGDA AAGVPEAAAA AVVAAGVV
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.