CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95498	Soybean	mitochondrion	87.7	87.42
KRH71448	Soybean	golgi, mitochondrion, plastid	62.78	59.33
KRH31999	Soybean	mitochondrion	62.14	55.81
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	55.66	53.58
VIT_09s0070g00710.t01	Wine grape	mitochondrion	52.43	52.26
PGSC0003DMT400002509	Potato	mitochondrion	51.13	49.53
Solyc09g064910.1.1	Tomato	mitochondrion	50.16	49.36
AT3G63110.1	Thale cress	plastid	53.4	49.11
CDX93935	Canola	plastid	52.75	48.8
Bra040431.1-P	Field mustard	mitochondrion, plastid	52.43	48.5
CDX89173	Canola	mitochondrion, plastid	52.43	48.5
CDY67797	Canola	mitochondrion	51.13	47.59
Bra007728.1-P	Field mustard	plastid	50.49	46.99
CDY63340	Canola	plastid	50.49	46.99
KRH51017	Soybean	plastid	49.19	45.24
KRG90838	Soybean	mitochondrion	33.33	44.59
HORVU5Hr1G110100.1	Barley	mitochondrion	43.37	44.37
KRH35941	Soybean	cytosol	43.37	44.08
KRH02126	Soybean	plastid	47.9	43.53
KRH11376	Soybean	extracellular	46.93	42.4
GSMUA_AchrUn_...	Banana	cytosol	38.84	41.96
Zm00001d034584_P001	Maize	plastid	44.66	41.95
Os07t0211700-00	Rice	plastid	45.95	40.92
EER96067	Sorghum	plastid	47.9	40.88
OQU90772	Sorghum	plastid	44.98	40.88
Zm00001d005239_P001	Maize	plastid	45.63	40.63
HORVU3Hr1G025950.1	Barley	cytosol	44.98	40.17
TraesCS5A01G181100.1	Wheat	mitochondrion	37.86	40.07
Zm00001d013021_P001	Maize	plastid	43.69	40.06
Zm00001d040810_P001	Maize	cytosol	45.63	40.06
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	37.86	39.93
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	37.86	39.93
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	44.34	39.6
TraesCS3A01G136200.1	Wheat	mitochondrion	44.01	39.31
Zm00001d019171_P001	Maize	plastid	46.28	39.29
Os03t0810100-01	Rice	extracellular	45.31	39.22
TraesCS5A01G460000.1	Wheat	plastid	44.34	39.03
TraesCS3D01G137000.1	Wheat	cytosol, plastid	44.01	38.86
TraesCS5D01G471100.1	Wheat	cytosol	44.01	38.75
TraesCS5B01G469600.1	Wheat	cytosol	44.01	38.75
EES02950	Sorghum	cytosol	45.95	38.59
KRH46921	Soybean	cytosol	36.57	38.57
Os05t0311801-00	Rice	cytosol	42.07	38.12
KRH01762	Soybean	extracellular, golgi, vacuole	40.78	37.84
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	37.86	36.45
Zm00001d003869_P001	Maize	cytosol	37.86	36.34
TraesCS5D01G185500.1	Wheat	plastid	37.22	35.83
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	37.22	35.28
Os03t0356900-01	Rice	extracellular	36.89	35.08
KRH20915	Soybean	cytosol	17.48	35.06
EES12063	Sorghum	cytosol	38.51	35.0
Os03t0358900-00	Rice	cytosol	36.89	34.76
GSMUA_AchrUn_...	Banana	mitochondrion	38.51	34.1
TraesCS1B01G323900.1	Wheat	plastid	29.13	32.14
TraesCS1A01G057000.1	Wheat	cytosol	38.51	30.51
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	38.51	30.36
KRH30498	Soybean	cytosol	37.54	24.27
KRH25178	Soybean	cytosol	22.33	22.92
KRH21996	Soybean	mitochondrion	24.27	16.74

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	EntrezGene:100799520	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:ACUP02002041
EnsemblPlantsGene:GLYMA_03G151800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	UniProt:I1JNS5	InterPro:IPT
EnsemblPlants:KRH67172	ProteinID:KRH67172	ProteinID:KRH67172.1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI0002951427	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:36688537..36689752

Molecular Weight (calculated)

34618.6 Da

IEP (calculated)

9.266

GRAVY (calculated)

-0.311

Length

309 amino acids

Sequence
(BLAST)

001: MTMTMSRVMC RPTQPLKNVP SNSSISGQNQ IIRPKEKVVL VMGATGSGKT RLSIDLATCF PSEIINSDKI QVYSGLDVVT NKATKEEQRG VPHHLLGTQN
101: PNTEFTASDF CHMASHAIES ITHREKVPII VGGSNSYIEA LVDKFGPRYD WCCLWVDVST SVLHSYVAQR VDHMLGGGMV NELRPFFSPN GDYSKGIRKA
201: IGVPEFDAYF RREAFSSNET RVSLLQDAVR DVKRNTCHLA CKQIGRIHRL RSVKGWKIHR VCATPVFQKR GQEANDAWKN IVAQPCASIV SHFLYSTANH
301: DYQPLELIR

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.