Factsheet for Bra007728.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63340	Canola	plastid	100.0	100.0
CDY67797	Canola	mitochondrion	96.69	96.69
Bra040431.1-P	Field mustard	mitochondrion, plastid	84.94	84.43
AT3G63110.1	Thale cress	plastid	82.83	81.85
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	54.22	56.07
VIT_09s0070g00710.t01	Wine grape	mitochondrion	49.7	53.23
KRH67172	Soybean	plastid	46.99	50.49
Solyc09g064910.1.1	Tomato	mitochondrion	47.59	50.32
PGSC0003DMT400002509	Potato	mitochondrion	47.59	49.53
KRG95498	Soybean	mitochondrion	45.78	49.03
KRH71448	Soybean	golgi, mitochondrion, plastid	48.19	48.93
KRH31999	Soybean	mitochondrion	50.0	48.26
Bra023701.1-P	Field mustard	cytosol	47.59	47.73
Bra002204.1-P	Field mustard	mitochondrion	47.59	47.31
HORVU5Hr1G110100.1	Barley	mitochondrion	42.77	47.02
GSMUA_AchrUn_...	Banana	cytosol	38.86	45.1
Zm00001d034584_P001	Maize	plastid	44.28	44.68
Bra014968.1-P	Field mustard	plastid	44.58	44.58
TraesCS5A01G181100.1	Wheat	mitochondrion	38.55	43.84
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	38.55	43.69
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	38.55	43.69
Bra037537.1-P	Field mustard	plastid	42.47	43.52
HORVU3Hr1G025950.1	Barley	cytosol	44.88	43.06
OQU90772	Sorghum	plastid	43.98	42.94
TraesCS3D01G137000.1	Wheat	cytosol, plastid	45.18	42.86
Bra001737.1-P	Field mustard	plastid	42.17	42.81
Os07t0211700-00	Rice	plastid	44.58	42.65
Os03t0810100-01	Rice	extracellular	45.78	42.58
Zm00001d013021_P001	Maize	plastid	43.07	42.43
TraesCS3A01G136200.1	Wheat	mitochondrion	43.98	42.2
Zm00001d005239_P001	Maize	plastid	43.98	42.07
Zm00001d019171_P001	Maize	plastid	45.78	41.76
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	43.37	41.62
TraesCS5D01G471100.1	Wheat	cytosol	43.98	41.6
TraesCS5B01G469600.1	Wheat	cytosol	43.98	41.6
TraesCS5A01G460000.1	Wheat	plastid	43.98	41.6
Bra028326.1-P	Field mustard	plastid	37.35	41.2
EER96067	Sorghum	plastid	44.88	41.16
Bra004037.1-P	Field mustard	plastid	41.27	41.14
Os05t0311801-00	Rice	cytosol	42.17	41.06
Zm00001d040810_P001	Maize	cytosol	43.07	40.62
EES02950	Sorghum	cytosol	44.58	40.22
Os03t0356900-01	Rice	extracellular	39.16	40.0
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	37.95	39.25
TraesCS5D01G185500.1	Wheat	plastid	37.65	38.94
Bra033933.1-P	Field mustard	plastid	42.47	38.74
Os03t0358900-00	Rice	cytosol	37.95	38.41
Zm00001d003869_P001	Maize	cytosol	37.05	38.2
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	35.54	36.2
EES12063	Sorghum	cytosol	37.05	36.18
GSMUA_AchrUn_...	Banana	mitochondrion	37.65	35.82
TraesCS1B01G323900.1	Wheat	plastid	27.71	32.86
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	37.35	31.63
TraesCS1A01G057000.1	Wheat	cytosol	36.14	30.77
Bra034366.1-P	Field mustard	cytosol	31.02	22.25
Bra006535.1-P	Field mustard	plastid	22.59	16.2
Bra020081.1-P	Field mustard	plastid	22.29	15.95

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:AB186133	ProteinID:BAE43827
ProteinID:BAE43827.1	EnsemblPlantsGene:Bra007728	EnsemblPlants:Bra007728.1	EnsemblPlants:Bra007728.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
InterPro:IPT	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	UniProt:Q402G9
SUPFAM:SSF52540	UniParc:UPI00005A9B2C	SEG:seg	:	:	:

Description

AT3G63110 (E=5e-140) ATIPT3, IPT3 | ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3); ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups

Coordinates

chrA09:-:30589763..30590761

Molecular Weight (calculated)

37570.5 Da

IEP (calculated)

8.271

GRAVY (calculated)

-0.187

Length

332 amino acids

Sequence
(BLAST)

001: MIMKISMAMC KQSLPPSTNL EFSPARFGPN MLTLNPYVPK EKVVVIMGAT GTGKSRLSVD LATRFQAEII NSDKIQVHQG LDIVTNKITT EERCGVPHHL
101: LSVLPPQADL TAANFCHMAN LSVESVLNRG KLPIIVGGSN SYVEALVDDD DYKFRSKYDC CFLWVDVALP VLNRFVSERV DKMVQNGMVE EARDFFDYSD
201: SDYSRGIKKA IGVPEFDIFF RNEPFLNLGD REALLNKVVD EIKSNTFKLA CRQREKIERL RKIKKWCIQR LDATPVITRR RSKVDADVAW ERLVARPSTE
301: AVSRFLLDID SPRMFVEAST GAVREREMSL VA

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.