CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 2
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31999	Soybean	mitochondrion	85.02	80.81
KRG95498	Soybean	mitochondrion	59.63	62.9
KRH67172	Soybean	plastid	59.33	62.78
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	52.29	53.27
VIT_09s0070g00710.t01	Wine grape	mitochondrion	47.4	50.0
CDX93935	Canola	plastid	49.85	48.8
Solyc09g064910.1.1	Tomato	mitochondrion	46.79	48.73
Bra040431.1-P	Field mustard	mitochondrion, plastid	49.24	48.2
CDX89173	Canola	mitochondrion, plastid	49.24	48.2
Bra007728.1-P	Field mustard	plastid	48.93	48.19
CDY63340	Canola	plastid	48.93	48.19
CDY67797	Canola	mitochondrion	48.62	47.89
PGSC0003DMT400002509	Potato	mitochondrion	46.48	47.65
AT3G63110.1	Thale cress	plastid	48.62	47.32
HORVU5Hr1G110100.1	Barley	mitochondrion	42.81	46.36
KRH35941	Soybean	cytosol	41.9	45.07
GSMUA_AchrUn_...	Banana	cytosol	39.14	44.76
KRH02126	Soybean	plastid	46.18	44.41
KRH11376	Soybean	extracellular	46.18	44.15
KRH51017	Soybean	plastid	45.26	44.05
KRG90838	Soybean	mitochondrion	30.58	43.29
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	37.31	41.64
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	37.31	41.64
KRH46921	Soybean	cytosol	37.0	41.3
TraesCS5A01G181100.1	Wheat	mitochondrion	36.7	41.1
Zm00001d034584_P001	Maize	plastid	41.28	41.03
KRH01762	Soybean	extracellular, golgi, vacuole	41.59	40.84
TraesCS5A01G460000.1	Wheat	plastid	43.43	40.46
OQU90772	Sorghum	plastid	41.59	40.0
TraesCS5B01G469600.1	Wheat	cytosol	42.81	39.89
Zm00001d005239_P001	Maize	plastid	42.2	39.77
KRH20915	Soybean	cytosol	18.65	39.61
TraesCS5D01G471100.1	Wheat	cytosol	42.51	39.6
Os07t0211700-00	Rice	plastid	41.9	39.48
Zm00001d003869_P001	Maize	cytosol	38.84	39.44
EES12063	Sorghum	cytosol	40.67	39.12
Os03t0810100-01	Rice	extracellular	42.51	38.94
Zm00001d013021_P001	Maize	plastid	39.76	38.58
Zm00001d040810_P001	Maize	cytosol	41.28	38.35
HORVU3Hr1G025950.1	Barley	cytosol	40.37	38.15
EER96067	Sorghum	plastid	42.2	38.12
Zm00001d019171_P001	Maize	plastid	42.2	37.91
TraesCS3A01G136200.1	Wheat	mitochondrion	40.06	37.86
Os03t0356900-01	Rice	extracellular	37.61	37.85
EES02950	Sorghum	cytosol	42.51	37.77
TraesCS3D01G137000.1	Wheat	cytosol, plastid	40.37	37.71
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	37.0	37.69
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	39.76	37.57
Os05t0311801-00	Rice	cytosol	39.14	37.54
Os03t0358900-00	Rice	cytosol	37.61	37.5
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	37.0	37.12
TraesCS5D01G185500.1	Wheat	plastid	36.09	36.76
GSMUA_AchrUn_...	Banana	mitochondrion	37.31	34.96
TraesCS1B01G323900.1	Wheat	plastid	28.13	32.86
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	38.84	32.4
TraesCS1A01G057000.1	Wheat	cytosol	37.92	31.79
KRH30498	Soybean	cytosol	33.95	23.22
KRH25178	Soybean	cytosol	20.8	22.59
KRH21996	Soybean	mitochondrion	24.46	17.86

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	EntrezGene:100799145	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:ACUP02000899
EnsemblPlantsGene:GLYMA_02G148600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	UniProt:I1JFC0	InterPro:IPT
EnsemblPlants:KRH71448	ProteinID:KRH71448	ProteinID:KRH71448.1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI0001BA6B2B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:15319273..15320731

Molecular Weight (calculated)

36868.7 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.237

Length

327 amino acids

Sequence
(BLAST)

001: MTISLFMCRV TQPIINVPCS GKKLIVRQIE KEKVVVVMGA TGAGKSRLSI DLATCFPSEI INADKIQVFE GLDIVTNKIS KEEQRGVPHH LLGTIKPNMD
101: FSVNDFCDTS SEAIDSITRC QKLPIVVGGS NSYLEALMDD DDYKFRSRYD ILCLWVDVEM SVLKSYVADR VDHMFYKGMV DELRPFYSPN GDYSRGVKRA
201: IGVPEFHEYF GREEVADEET KQRLLEQAVK EIKLNTCKLA MKQLGKIRRL RNVKRWHIHR LDATPVFRMR GEEANDAWKR LVAKPSALIV ARFLYNNNSK
301: NNANVVSGSG LRVQPAASES VLAAATC

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.