Factsheet for VIT_09s0070g00710.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	83.23	80.37
KRG95498	Soybean	mitochondrion	53.23	53.23
KRH67172	Soybean	plastid	52.26	52.43
VIT_05s0020g02630.t01	Wine grape	cytosol	55.16	51.82
CDX93935	Canola	plastid	55.16	51.2
Bra040431.1-P	Field mustard	mitochondrion, plastid	54.52	50.6
CDX89173	Canola	mitochondrion, plastid	54.52	50.6
AT3G63110.1	Thale cress	plastid	54.84	50.6
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	41.94	50.39
Bra007728.1-P	Field mustard	plastid	53.23	49.7
CDY63340	Canola	plastid	53.23	49.7
CDY67797	Canola	mitochondrion	52.58	49.1
Solyc09g064910.1.1	Tomato	mitochondrion	49.68	49.04
KRH31999	Soybean	mitochondrion	53.87	48.55
PGSC0003DMT400002509	Potato	mitochondrion	49.35	47.96
GSMUA_AchrUn_...	Banana	cytosol	44.19	47.9
KRH71448	Soybean	golgi, mitochondrion, plastid	50.0	47.4
HORVU5Hr1G110100.1	Barley	mitochondrion	44.19	45.36
Zm00001d034584_P001	Maize	plastid	44.84	42.25
Os07t0211700-00	Rice	plastid	46.45	41.5
OQU90772	Sorghum	plastid	45.48	41.47
Zm00001d013021_P001	Maize	plastid	44.52	40.95
TraesCS5A01G460000.1	Wheat	plastid	46.13	40.74
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	38.39	40.61
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	38.39	40.61
VIT_01s0011g03640.t01	Wine grape	plastid	43.23	40.61
TraesCS5A01G181100.1	Wheat	mitochondrion	38.06	40.41
TraesCS5D01G471100.1	Wheat	cytosol	45.48	40.17
TraesCS5B01G469600.1	Wheat	cytosol	45.48	40.17
Os03t0810100-01	Rice	extracellular	45.81	39.78
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	44.19	39.6
Zm00001d040810_P001	Maize	cytosol	44.84	39.49
Zm00001d005239_P001	Maize	plastid	44.19	39.48
TraesCS3D01G137000.1	Wheat	cytosol, plastid	44.52	39.43
HORVU3Hr1G025950.1	Barley	cytosol	43.87	39.31
TraesCS3A01G136200.1	Wheat	mitochondrion	43.55	39.02
EES02950	Sorghum	cytosol	46.13	38.86
GSMUA_AchrUn_...	Banana	mitochondrion	43.23	38.4
Os05t0311801-00	Rice	cytosol	41.94	38.12
EER96067	Sorghum	plastid	44.52	38.12
Zm00001d019171_P001	Maize	plastid	44.52	37.91
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	39.03	37.69
Os03t0356900-01	Rice	extracellular	39.35	37.54
TraesCS5D01G185500.1	Wheat	plastid	37.74	36.45
Zm00001d003869_P001	Maize	cytosol	37.74	36.34
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	37.74	35.89
Os03t0358900-00	Rice	cytosol	37.1	35.06
EES12063	Sorghum	cytosol	38.06	34.71
TraesCS1A01G057000.1	Wheat	cytosol	39.03	31.03
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	38.39	30.36
TraesCS1B01G323900.1	Wheat	plastid	26.77	29.64
VIT_06s0061g01410.t01	Wine grape	nucleus	37.74	24.68
VIT_19s0014g01630.t01	Wine grape	mitochondrion	22.58	17.68

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	EntrezGene:100261184	wikigene:100261184	MapMan:11.4.1.1	Gene3D:3.40.50.300
ProteinID:CBI38978	ProteinID:CBI38978.3	UniProt:D7U8B4	EMBL:FN596740	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006400	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0052381	InterPro:IPT	EntrezGene:LOC100261184	wikigene:LOC100261184	InterPro:P-loop_NTPase	PFAM:PF01715
PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	SUPFAM:SSF52540	UniParc:UPI0001BE51B8	ArrayExpress:VIT_09s0070g00710	EnsemblPlantsGene:VIT_09s0070g00710
EnsemblPlants:VIT_09s0070g00710.t01	RefSeq:XP_002268848	RefSeq:XP_002268848.2	RefSeq:XP_019077953.1	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:14301813..14302745

Molecular Weight (calculated)

34730.1 Da

IEP (calculated)

6.902

GRAVY (calculated)

-0.139

Length

310 amino acids

Sequence
(BLAST)

001: MLMCKQTQPL LSMPPGGLTM AVSSHRWLKE KVAVVMGATG TGKSRLSIDP ATRFPAEIVN SHKMQVYEGL DIITNKITEE EQPGAPHHHL GIAHPNVDFT
101: ASDFRDMASL SIESILGGRR LPIIVGGSNS YIDARYECCF LWVDVSRPVL HSFVSKRVDK MVGNGMVEEV EQLFYPNADY TRGIRRAIGV PELDLYFPTG
201: FLDEEARAKV LQEAVHEIKA NTCKLACRQL EGIHRLKNLR KWKIHRLDAT EVFLKHDREA DEAWEKLVAR PSTMMVAQFL YSVGATRVAT EEMVRNAALL
301: LLCDLVGDDV

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.