CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71448	Soybean	golgi, mitochondrion, plastid	80.81	85.02
KRH67172	Soybean	plastid	55.81	62.14
KRG95498	Soybean	mitochondrion	55.81	61.94
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	51.16	54.83
VIT_09s0070g00710.t01	Wine grape	mitochondrion	48.55	53.87
CDX93935	Canola	plastid	49.13	50.6
Bra007728.1-P	Field mustard	plastid	48.26	50.0
Solyc09g064910.1.1	Tomato	mitochondrion	45.64	50.0
CDY63340	Canola	plastid	48.26	50.0
CDX89173	Canola	mitochondrion, plastid	48.55	50.0
Bra040431.1-P	Field mustard	mitochondrion, plastid	48.55	50.0
PGSC0003DMT400002509	Potato	mitochondrion	46.22	49.84
CDY67797	Canola	mitochondrion	47.97	49.7
AT3G63110.1	Thale cress	plastid	47.09	48.21
KRH35941	Soybean	cytosol	41.28	46.71
HORVU5Hr1G110100.1	Barley	mitochondrion	40.99	46.69
GSMUA_AchrUn_...	Banana	cytosol	37.79	45.45
KRG90838	Soybean	mitochondrion	30.52	45.45
KRH11376	Soybean	extracellular	43.6	43.86
KRH02126	Soybean	plastid	43.31	43.82
KRH51017	Soybean	plastid	42.44	43.45
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	35.76	41.98
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	35.76	41.98
Zm00001d034584_P001	Maize	plastid	40.12	41.95
TraesCS5A01G181100.1	Wheat	mitochondrion	35.47	41.78
KRH20915	Soybean	cytosol	18.31	40.91
OQU90772	Sorghum	plastid	40.41	40.88
TraesCS5A01G460000.1	Wheat	plastid	41.28	40.46
KRH46921	Soybean	cytosol	34.3	40.27
TraesCS5B01G469600.1	Wheat	cytosol	40.99	40.17
TraesCS5D01G471100.1	Wheat	cytosol	40.7	39.89
Zm00001d005239_P001	Maize	plastid	40.12	39.77
Os07t0211700-00	Rice	plastid	40.12	39.77
KRH01762	Soybean	extracellular, golgi, vacuole	38.08	39.34
Zm00001d003869_P001	Maize	cytosol	36.63	39.13
Os03t0810100-01	Rice	extracellular	40.41	38.94
EES02950	Sorghum	cytosol	41.28	38.59
Zm00001d013021_P001	Maize	plastid	37.79	38.58
EER96067	Sorghum	plastid	40.41	38.4
Zm00001d040810_P001	Maize	cytosol	39.24	38.35
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	35.76	38.32
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	36.05	38.04
HORVU3Hr1G025950.1	Barley	cytosol	38.08	37.86
Os05t0311801-00	Rice	cytosol	37.5	37.83
TraesCS3D01G137000.1	Wheat	cytosol, plastid	38.37	37.71
EES12063	Sorghum	cytosol	37.21	37.65
TraesCS3A01G136200.1	Wheat	mitochondrion	37.79	37.57
Os03t0356900-01	Rice	extracellular	35.47	37.54
Zm00001d019171_P001	Maize	plastid	39.53	37.36
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	37.5	37.28
Os03t0358900-00	Rice	cytosol	35.47	37.2
TraesCS5D01G185500.1	Wheat	plastid	34.59	37.07
GSMUA_AchrUn_...	Banana	mitochondrion	35.76	35.24
TraesCS1A01G057000.1	Wheat	cytosol	38.66	34.1
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	38.66	33.93
TraesCS1B01G323900.1	Wheat	plastid	26.16	32.14
KRH30498	Soybean	cytosol	32.85	23.64
KRH25178	Soybean	cytosol	19.77	22.59
KRH21996	Soybean	mitochondrion	22.97	17.63

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	EntrezGene:100803964	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:ACUP02006092
EnsemblPlantsGene:GLYMA_10G025300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	UniProt:I1L825	InterPro:IPT
EnsemblPlants:KRH31999	ProteinID:KRH31999	ProteinID:KRH31999.1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI000233C674	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:2189157..2190507

Molecular Weight (calculated)

38823.8 Da

IEP (calculated)

6.763

GRAVY (calculated)

-0.235

Length

344 amino acids

Sequence
(BLAST)

001: MTISMFMCRL TQSIINVPCS GKKLNMRQIE KEKIVVVMGA TGAGKSRLSI DLATCFPSEI INSDKIQVYE GLDIVTNKIS KEDQRGVPHH LLGIINPNMD
101: FSANDFCDTS SEIIASITRS ERLPIIVGGS NSYLEALIDD DDYKCRSRFD FLCLWVDVAM PDLQSYVAER VDDMLYNGMV DELRPFYSPN GDYSRGVRRA
201: IGVPEFDEYF RREEEVVDEE TRTRLLEEAV KEMKLNTCKL AMKQLGKIRR LRNVKRWEIH RLDATPVFRR RGEEANEAWK KLVAEPSAMI VARFLYNSNS
301: KNNATNVVSG SGLRVKPATS SETVLAAATW LASFLGVVLV GKDL

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.