CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67172	Soybean	plastid	87.42	87.7
KRH71448	Soybean	golgi, mitochondrion, plastid	62.9	59.63
KRH31999	Soybean	mitochondrion	61.94	55.81
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	56.45	54.52
VIT_09s0070g00710.t01	Wine grape	mitochondrion	53.23	53.23
Solyc09g064910.1.1	Tomato	mitochondrion	50.0	49.36
PGSC0003DMT400002509	Potato	mitochondrion	50.65	49.22
AT3G63110.1	Thale cress	plastid	52.26	48.21
CDX93935	Canola	plastid	51.29	47.6
Bra040431.1-P	Field mustard	mitochondrion, plastid	50.97	47.31
CDX89173	Canola	mitochondrion, plastid	50.97	47.31
CDY67797	Canola	mitochondrion	49.68	46.39
Bra007728.1-P	Field mustard	plastid	49.03	45.78
CDY63340	Canola	plastid	49.03	45.78
KRH51017	Soybean	plastid	49.35	45.54
KRH02126	Soybean	plastid	49.35	45.0
HORVU5Hr1G110100.1	Barley	mitochondrion	43.55	44.7
KRH35941	Soybean	cytosol	42.26	43.09
GSMUA_AchrUn_...	Banana	cytosol	39.68	43.01
KRG90838	Soybean	mitochondrion	31.61	42.42
KRH11376	Soybean	extracellular	46.13	41.81
Zm00001d034584_P001	Maize	plastid	43.87	41.34
OQU90772	Sorghum	plastid	45.16	41.18
Zm00001d013021_P001	Maize	plastid	43.55	40.06
Os03t0810100-01	Rice	extracellular	45.81	39.78
Os07t0211700-00	Rice	plastid	44.52	39.77
Zm00001d040810_P001	Maize	cytosol	44.84	39.49
Zm00001d005239_P001	Maize	plastid	44.19	39.48
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	43.87	39.31
HORVU3Hr1G025950.1	Barley	cytosol	43.87	39.31
EER96067	Sorghum	plastid	45.81	39.23
TraesCS3D01G137000.1	Wheat	cytosol, plastid	44.19	39.14
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	36.77	38.91
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	36.77	38.91
TraesCS3A01G136200.1	Wheat	mitochondrion	43.23	38.73
TraesCS5A01G181100.1	Wheat	mitochondrion	36.45	38.7
TraesCS5A01G460000.1	Wheat	plastid	43.55	38.46
TraesCS5D01G471100.1	Wheat	cytosol	43.23	38.18
TraesCS5B01G469600.1	Wheat	cytosol	43.23	38.18
Zm00001d019171_P001	Maize	plastid	44.52	37.91
KRH46921	Soybean	cytosol	35.81	37.88
KRH01762	Soybean	extracellular, golgi, vacuole	40.65	37.84
EES02950	Sorghum	cytosol	44.84	37.77
Os05t0311801-00	Rice	cytosol	40.97	37.24
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	36.45	35.2
Zm00001d003869_P001	Maize	cytosol	36.45	35.09
Os03t0356900-01	Rice	extracellular	36.77	35.08
Os03t0358900-00	Rice	cytosol	37.1	35.06
GSMUA_AchrUn_...	Banana	mitochondrion	38.71	34.38
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	36.13	34.36
EES12063	Sorghum	cytosol	37.42	34.12
TraesCS5D01G185500.1	Wheat	plastid	35.16	33.96
KRH20915	Soybean	cytosol	16.45	33.12
TraesCS1B01G323900.1	Wheat	plastid	28.06	31.07
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	37.74	29.85
TraesCS1A01G057000.1	Wheat	cytosol	36.77	29.23
KRH30498	Soybean	cytosol	37.42	24.27
KRH25178	Soybean	cytosol	21.61	22.26
KRH21996	Soybean	mitochondrion	23.87	16.52

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:ACUP02012113	EnsemblPlantsGene:GLYMA_19G154400
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	UniProt:I1N9F8	InterPro:IPT	EnsemblPlants:KRG95498
ProteinID:KRG95498	ProteinID:KRG95498.1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49
MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI000233EFF3	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:41471018..41471950

Molecular Weight (calculated)

34728.8 Da

IEP (calculated)

9.598

GRAVY (calculated)

-0.356

Length

310 amino acids

Sequence
(BLAST)

001: MTMSRVMCRP TQPLKNVPTN TSSGQNQIIR PKEKVVLVMG ATGSGKTRLS IDLATCFPSE IINSDKMQVY SGLDVVTNKA TKEEQRGIPH HLLGTQNPNK
101: EFTASDFCDM ASHAIESITN REKVPIIVGG SNSYMEALVD KFGTRYEWCC LWVDVSTPVL HSYVAQRVDQ MIGGGMVNEL RPFFSPNGDY SKGIRKAIGV
201: PEFHEYFRRE AFSSTEMRMR LLQDAVREVK RNTCHLACKQ LGRIQWLRSV KGWKIHRVCA TPVFQKRGQE ANDAWKNVVA QPCASIVSQF LYSANAVSGR
301: VPASLQQNSH

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.