CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02126	Soybean	plastid	90.18	89.12
KRH11376	Soybean	extracellular	64.29	63.16
KRH20915	Soybean	cytosol	27.38	59.74
VIT_05s0020g02630.t01	Wine grape	cytosol	52.08	53.03
AT5G19040.1	Thale cress	mitochondrion	49.4	50.3
KRG95498	Soybean	mitochondrion	45.54	49.35
CDY47191	Canola	cytosol	48.51	49.24
Bra023701.1-P	Field mustard	cytosol	48.51	49.24
KRH67172	Soybean	plastid	45.24	49.19
CDY02590	Canola	cytosol	48.51	48.8
CDX92563	Canola	mitochondrion	47.92	48.2
CDY13945	Canola	mitochondrion	47.92	48.2
Bra002204.1-P	Field mustard	mitochondrion	47.92	48.2
CDX77492	Canola	plastid	44.94	45.48
HORVU5Hr1G110100.1	Barley	mitochondrion	40.77	45.36
KRH71448	Soybean	golgi, mitochondrion, plastid	44.05	45.26
Bra014968.1-P	Field mustard	plastid	44.64	45.18
AT3G23630.1	Thale cress	mitochondrion, plastid	43.75	44.68
CDX85119	Canola	plastid	44.05	44.58
GSMUA_AchrUn_...	Banana	cytosol	37.8	44.41
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	43.15	44.07
KRH35941	Soybean	cytosol	39.58	43.75
PGSC0003DMT400083203	Potato	cytosol	42.86	43.64
Zm00001d040810_P001	Maize	cytosol	44.94	42.9
KRG90838	Soybean	mitochondrion	29.46	42.86
Bra028326.1-P	Field mustard	plastid	38.1	42.52
KRH31999	Soybean	mitochondrion	43.45	42.44
Zm00001d034584_P001	Maize	plastid	40.77	41.64
EES02950	Sorghum	cytosol	44.35	40.49
OQU90772	Sorghum	plastid	40.48	40.0
CDY18104	Canola	cytosol	33.63	39.93
Os05t0311801-00	Rice	cytosol	40.48	39.88
Zm00001d005239_P001	Maize	plastid	41.07	39.77
Zm00001d013021_P001	Maize	plastid	39.88	39.76
TraesCS5A01G181100.1	Wheat	mitochondrion	34.52	39.73
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	40.77	39.6
TraesCS3D01G137000.1	Wheat	cytosol, plastid	40.77	39.14
TraesCS5A01G460000.1	Wheat	plastid	40.77	39.03
KRH01762	Soybean	extracellular, golgi, vacuole	38.39	38.74
HORVU3Hr1G025950.1	Barley	cytosol	39.88	38.73
TraesCS3A01G136200.1	Wheat	mitochondrion	39.88	38.73
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	33.63	38.57
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	33.63	38.57
KRH46921	Soybean	cytosol	33.63	38.57
TraesCS5D01G471100.1	Wheat	cytosol	40.18	38.46
EER96067	Sorghum	plastid	41.37	38.4
TraesCS5B01G469600.1	Wheat	cytosol	39.88	38.18
Zm00001d019171_P001	Maize	plastid	41.07	37.91
Os03t0810100-01	Rice	extracellular	40.18	37.82
Os07t0211700-00	Rice	plastid	38.99	37.75
Os03t0356900-01	Rice	extracellular	36.31	37.54
Os03t0358900-00	Rice	cytosol	35.42	36.28
TraesCS5D01G185500.1	Wheat	plastid	33.93	35.51
Zm00001d003869_P001	Maize	cytosol	33.93	35.4
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	33.63	35.2
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	33.33	34.36
EES12063	Sorghum	cytosol	34.52	34.12
GSMUA_AchrUn_...	Banana	mitochondrion	34.23	32.95
TraesCS1B01G323900.1	Wheat	plastid	27.08	32.5
TraesCS1A01G057000.1	Wheat	cytosol	36.61	31.54
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	35.71	30.61
KRH30498	Soybean	cytosol	35.71	25.1
KRH25178	Soybean	cytosol	20.54	22.92
KRH21996	Soybean	mitochondrion	23.51	17.63

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	EntrezGene:100782474	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:ACUP02004726
EnsemblPlantsGene:GLYMA_07G256700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	InterPro:IPT	UniProt:K7L3U8
EnsemblPlants:KRH51017	ProteinID:KRH51017	ProteinID:KRH51017.1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI0002338EDB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:43273893..43275923

Molecular Weight (calculated)

37445.0 Da

IEP (calculated)

8.958

GRAVY (calculated)

-0.219

Length

336 amino acids

Sequence
(BLAST)

001: MMNMLSVSAA LCKPVASFNP ASHSLRNMNS LSLFMNKKEK VVVIMGATGT GKSKLAIELA TQFPPAEIVN SDKMQVYEGL NITTNKVTEE ERRGVPHHLL
101: GTVNPNTSFT AQDFCDQATL AVGSILGRDG LPIIAGGSNS FLDALVNHHT EFRLRYDCCF LWVDVSLPVL HSSLSARVDR MIHSGQLHEV RQSFQYHNQD
201: YTLGIRKAIG VPEFHDFFRA EADGADQRTK QRLLQAAIAS LKTNNCTLAK RQLQKIHRLY SMWKRNMHRL DATEVFLKTT RQEAEEAWED HVLSKTRRIL
301: HKFLYEDTHV VPAGIASVVI ASSPPPMPAT AAAATH

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.