CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014968.1-P	Field mustard	plastid	99.7	99.7
CDX85119	Canola	plastid	98.49	98.49
AT3G23630.1	Thale cress	mitochondrion, plastid	85.54	86.32
CDY18104	Canola	cytosol	72.29	84.81
CDY13945	Canola	mitochondrion	56.02	55.69
CDX92563	Canola	mitochondrion	56.02	55.69
CDY02590	Canola	cytosol	55.72	55.39
CDY47191	Canola	cytosol	55.12	55.29
VIT_05s0020g02630.t01	Wine grape	cytosol	51.51	51.82
HORVU5Hr1G110100.1	Barley	mitochondrion	43.07	47.35
GSMUA_AchrUn_...	Banana	cytosol	39.16	45.45
KRH51017	Soybean	plastid	45.48	44.94
CDY67797	Canola	mitochondrion	44.88	44.88
CDY63340	Canola	plastid	44.88	44.88
KRH11376	Soybean	extracellular	46.08	44.74
KRH02126	Soybean	plastid	45.48	44.41
CDX93935	Canola	plastid	42.77	42.52
Zm00001d034584_P001	Maize	plastid	41.87	42.25
PGSC0003DMT400083203	Potato	cytosol	41.87	42.12
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	37.05	41.98
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	37.05	41.98
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	41.57	41.95
CDX89173	Canola	mitochondrion, plastid	42.17	41.92
TraesCS5A01G181100.1	Wheat	mitochondrion	36.75	41.78
OQU90772	Sorghum	plastid	42.77	41.76
Zm00001d013021_P001	Maize	plastid	41.87	41.25
TraesCS5A01G460000.1	Wheat	plastid	43.37	41.03
TraesCS5D01G471100.1	Wheat	cytosol	43.07	40.74
TraesCS5B01G469600.1	Wheat	cytosol	43.07	40.74
Zm00001d005239_P001	Maize	plastid	41.57	39.77
Os03t0810100-01	Rice	extracellular	42.47	39.5
Zm00001d019171_P001	Maize	plastid	43.07	39.29
CDY04228	Canola	plastid	37.65	39.19
EER96067	Sorghum	plastid	42.47	38.95
CDY07385	Canola	plastid	37.35	38.75
Os03t0358900-00	Rice	cytosol	38.25	38.72
TraesCS5D01G185500.1	Wheat	plastid	37.35	38.63
CDX95461	Canola	plastid	37.65	38.58
CDY22984	Canola	plastid	35.54	38.44
Zm00001d040810_P001	Maize	cytosol	40.66	38.35
Os07t0211700-00	Rice	plastid	40.06	38.33
CDY18571	Canola	plastid	37.35	38.27
CDY44896	Canola	plastid	38.55	38.21
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	36.75	38.01
Os03t0356900-01	Rice	extracellular	37.05	37.85
HORVU3Hr1G025950.1	Barley	cytosol	39.16	37.57
Os05t0311801-00	Rice	cytosol	38.55	37.54
EES02950	Sorghum	cytosol	41.57	37.5
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	36.75	37.42
CDX81518	Canola	plastid	39.16	37.36
TraesCS3D01G137000.1	Wheat	cytosol, plastid	39.16	37.14
TraesCS3A01G136200.1	Wheat	mitochondrion	38.55	36.99
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	38.55	36.99
KRH20915	Soybean	cytosol	16.87	36.36
CDX82308	Canola	plastid	35.24	35.89
EES12063	Sorghum	cytosol	36.75	35.88
Zm00001d003869_P001	Maize	cytosol	34.64	35.71
GSMUA_AchrUn_...	Banana	mitochondrion	35.84	34.1
TraesCS1B01G323900.1	Wheat	plastid	28.01	33.21
TraesCS1A01G057000.1	Wheat	cytosol	37.35	31.79
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	37.35	31.63
CDY30532	Canola	cytosol	32.53	23.28
CDY45111	Canola	plastid	12.05	18.18
CDX77133	Canola	plastid	33.73	15.77
CDX70907	Canola	plastid	21.99	15.77
CDX88863	Canola	plastid	21.99	15.77

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	GO:A0A078CL87	EnsemblPlants:CDX77492
ProteinID:CDX77492	ProteinID:CDX77492.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00128365001	InterPro:IPT
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540
UniParc:UPI00005A9B2E	SEG:seg	:	:	:	:

Description

BnaA07g06300D

Coordinates

chrLK031811:-:1205891..1206889

Molecular Weight (calculated)

37147.9 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.222

Length

332 amino acids

Sequence
(BLAST)

001: MKFSISAMKQ VQPILSFKNK LSMVNVNSFL RPQEKVVFVM GATGSGKSRL AIDLATRFQT EIINSDKIQV YKGLDVLTNK VTPQECRGVP HHLLGVFDSE
101: AGNLTATDFC RLASQEISTL SANNKLPIVA GGSNSYIEAL ANHSSGFLLN KYQCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVH DPKADYSVGI
201: RRAIGVPELH EYLCYESLVD RGTQRKMLDA AVKKIKENTE ILACRQLLKI QRLSKKWKLS MHRVDATEVF LKRTEEEADE AWENLVARQT KRIVDKFCDN
301: QVMKNDDVEH CLTSIGAASY GGGSGSRAHN MV

Best Arabidopsis Sequence Match ( AT3G23630.1 )
(BLAST)

001: MKFSISSLKQ VQPILCFKNK LSKVNVNSFL HPKEKVIFVM GATGSGKSRL AIDLATRFQG EIINSDKIQL YKGLDVLTNK VTPKECRGVP HHLLGVFDSE
101: AGNLTATQYS RLASQAISKL SANNKLPIVA GGSNSYIEAL VNHSSGFLLN NYDCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVF NPKANYSVGI
201: RRAIGVPELH EYLRNESLVD RATKSKMLDV AVKNIKKNTE ILACRQLKKI QRLHKKWKMS MHRVDATEVF LKRNVEEQDE AWENLVARPS ERIVDKFYNN
301: NNQLKNDDVE HCLAASYGGG SGSRAHNMI

Arabidopsis Description

IPT7Adenylate isopentenyltransferase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94ID1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.