CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037537.1-P	Field mustard	plastid	100.0	100.0
CDX95461	Canola	plastid	96.91	96.91
CDY22984	Canola	plastid	76.85	81.11
CDX82308	Canola	plastid	79.94	79.45
AT3G19160.1	Thale cress	plastid	71.91	70.61
CDY07385	Canola	plastid	55.25	55.94
CDY04228	Canola	plastid	54.32	55.17
GSMUA_Achr2P06730_001	Banana	cytosol	17.28	53.85
VIT_01s0011g03640.t01	Wine grape	plastid	54.63	53.64
CDY44896	Canola	plastid	55.25	53.43
CDX81518	Canola	plastid	57.1	53.16
GSMUA_Achr1P12830_001	Banana	cytosol	19.75	52.89
KRH35941	Soybean	cytosol	49.07	52.3
PGSC0003DMT400015411	Potato	cytosol	43.21	50.36
KRG90838	Soybean	mitochondrion	35.49	49.78
PGSC0003DMT400037749	Potato	cytosol	42.28	48.41
Solyc05g009410.1.1	Tomato	cytosol	41.98	48.06
Solyc04g007240.1.1	Tomato	plastid	44.75	44.62
CDX93935	Canola	plastid	44.75	43.41
CDX89173	Canola	mitochondrion, plastid	44.44	43.11
CDY63340	Canola	plastid	43.52	42.47
CDY67797	Canola	mitochondrion	42.9	41.87
GSMUA_Achr1P23110_001	Banana	cytosol	38.27	40.13
GSMUA_Achr4P06810_001	Banana	cytosol	37.65	39.87
GSMUA_Achr3P29480_001	Banana	cytosol	32.1	39.85
Os07t0190150-00	Rice	cytosol	27.78	38.3
CDX77492	Canola	plastid	38.27	37.35
CDX85119	Canola	plastid	37.96	37.05
CDY47191	Canola	cytosol	35.8	35.05
Os01t0688300-00	Rice	mitochondrion	36.11	34.82
CDX92563	Canola	mitochondrion	35.8	34.73
CDY02590	Canola	cytosol	35.8	34.73
CDY13945	Canola	mitochondrion	35.49	34.43
Os05t0551700-01	Rice	mitochondrion	36.11	32.5
TraesCS1B01G396700.1	Wheat	plastid	34.57	32.37
Zm00001d011618_P001	Maize	plastid	34.57	32.18
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	36.42	31.98
CDY18104	Canola	cytosol	27.78	31.8
HORVU0Hr1G006770.3	Barley	cytosol	27.16	31.65
TraesCS3B01G296500.1	Wheat	plastid	35.49	31.59
TraesCS3D01G263000.1	Wheat	plastid	35.8	31.44
HORVU1Hr1G083530.2	Barley	plastid	35.8	30.93
Zm00001d038921_P001	Maize	mitochondrion, plastid	35.19	30.89
Zm00001d043812_P001	Maize	plastid	33.64	30.79
KXG33157	Sorghum	mitochondrion, plastid	35.19	30.48
TraesCS1A01G376300.1	Wheat	plastid	36.42	30.03
KXG22495	Sorghum	mitochondrion	35.8	29.82
TraesCS1D01G383600.1	Wheat	plastid	35.8	29.59
GSMUA_Achr9P21400_001	Banana	cytosol	24.69	28.88
CDY30532	Canola	cytosol	33.95	23.71
CDY45111	Canola	plastid	13.58	20.0
CDX77133	Canola	plastid	35.19	16.06
CDX88863	Canola	plastid	21.91	15.33
CDX70907	Canola	plastid	21.3	14.9

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	GO:A0A078FZY6	UniProt:A0A078FZY6
EnsemblPlants:CDY18571	ProteinID:CDY18571	ProteinID:CDY18571.1	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00005617001	InterPro:IPT	InterPro:P-loop_NTPase	PFAM:PF01715
PANTHER:PTHR11088	PANTHER:PTHR11088:SF51	MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI0002544CB1	SEG:seg

Description

BnaA01g26240DBnaA01g26240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZY6]

Coordinates

chrLK032086:-:675547..677268

Molecular Weight (calculated)

36892.3 Da

IEP (calculated)

8.461

GRAVY (calculated)

-0.335

Length

324 amino acids

Sequence
(BLAST)

001: MQALTSFFVS RSLVPTTPRR PRVRPLSVPP MTVCIDQSRN EKVVVIMGST GTGKSRLSVD LATRFSAEII NSDKMQFYKG LEITTNQITI PERCGVPHHL
101: LGELPVDGPE LTASEFRSLA SGFISEMTSR GKLPIIAGGS NSFIHALLVE HFDPETNPFS KTLIPTELRY DCCFLWVDVS VSVLYHYLSK RVDQMMESGM
201: FEELADFYNS RDSRSTTRTG IHKSIGVPEF DRYFGVYPPE KNDKVCGWDP ARKVAYEEAV QEIKENTWRL SKKQIDRIMK LRSSGWEIHR LDATASFRAQ
301: SREVWDKNVL EKSVKIVKRF VLED

Best Arabidopsis Sequence Match ( AT3G19160.1 )
(BLAST)

001: MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH
101: HLLGELPPDD SELTTSEFRS LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV DVSVSVLFEY LSKRVDQMME
201: SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS
301: FGRSSREIWD NTVLDESIKV VKRFLVKDKV

Arabidopsis Description

IPT8Adenylate isopentenyltransferase 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.