Factsheet for Zm00001d038921_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22495	Sorghum	mitochondrion	83.74	79.43
Zm00001d011618_P001	Maize	plastid	64.5	68.39
TraesCS1B01G396700.1	Wheat	plastid	63.69	67.92
Zm00001d043812_P001	Maize	plastid	65.04	67.8
Os05t0551700-01	Rice	mitochondrion	65.31	66.94
HORVU1Hr1G083530.2	Barley	plastid	65.58	64.53
TraesCS1D01G383600.1	Wheat	plastid	66.67	62.76
TraesCS1A01G376300.1	Wheat	plastid	65.31	61.32
GSMUA_Achr1P12830_001	Banana	cytosol	19.51	59.5
GSMUA_Achr3P29480_001	Banana	cytosol	38.21	54.02
GSMUA_Achr2P06730_001	Banana	cytosol	15.18	53.85
GSMUA_Achr1P23110_001	Banana	cytosol	42.55	50.81
GSMUA_Achr4P06810_001	Banana	cytosol	40.38	48.69
PGSC0003DMT400015411	Potato	cytosol	32.52	43.17
VIT_01s0011g03640.t01	Wine grape	plastid	36.86	41.21
KRH35941	Soybean	cytosol	33.33	40.46
CDY07385	Canola	plastid	34.69	40.0
Solyc05g009410.1.1	Tomato	cytosol	30.62	39.93
KRG90838	Soybean	mitochondrion	24.93	39.83
Solyc04g007240.1.1	Tomato	plastid	34.69	39.38
Bra004037.1-P	Field mustard	plastid	35.23	39.04
CDY04228	Canola	plastid	33.6	38.87
Zm00001d034584_P001	Maize	plastid	34.42	38.6
PGSC0003DMT400037749	Potato	cytosol	29.54	38.52
CDY44896	Canola	plastid	34.96	38.51
CDY22984	Canola	plastid	31.71	38.11
CDX81518	Canola	plastid	35.77	37.93
AT3G19160.1	Thale cress	plastid	33.88	37.88
AT4G24650.1	Thale cress	cytosol	31.98	37.11
Bra033933.1-P	Field mustard	plastid	36.04	36.54
Zm00001d013021_P001	Maize	plastid	33.33	36.5
GSMUA_Achr9P21400_001	Banana	cytosol	27.37	36.46
AT1G68460.1	Thale cress	plastid	35.23	36.41
CDX82308	Canola	plastid	31.71	35.89
Bra001737.1-P	Field mustard	plastid	31.44	35.47
Zm00001d005239_P001	Maize	plastid	33.33	35.45
CDY18571	Canola	plastid	30.89	35.19
Bra037537.1-P	Field mustard	plastid	30.89	35.19
Zm00001d019171_P001	Maize	plastid	34.42	34.89
CDX95461	Canola	plastid	30.35	34.57
Zm00001d040810_P001	Maize	cytosol	30.62	32.1
AT1G25410.1	Thale cress	plastid	29.54	31.87
Zm00001d003869_P001	Maize	cytosol	27.64	31.68
Zm00001d041982_P001	Maize	plastid	28.18	22.13
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	17.62	15.89

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	UniProt:A0A1D6MBU9	ProteinID:AQK88231.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	InterPro:IPT	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF32	SUPFAM:SSF52540	UniParc:UPI00084330AE	EnsemblPlantsGene:Zm00001d038921	EnsemblPlants:Zm00001d038921_P001	EnsemblPlants:Zm00001d038921_T001
SEG:seg	:	:	:	:	:

Description

isopentenyl transferase8 isopentenyl transferase8

Coordinates

chr6:-:166949706..166950815

Molecular Weight (calculated)

38615.0 Da

IEP (calculated)

8.595

GRAVY (calculated)

-0.114

Length

369 amino acids

Sequence
(BLAST)

001: MAAAAVAGAR RPLHRTLAHP PPPEEDEHQQ QRACRSRGSS SSCSASSSST PARPRGTGMV VIVGATGTGK TKLSIDAAEA VGGEVVNADK IQLYAGLDVT
101: TNKVAPADRR GVPHHLLGAI RPEAGELPPS TFRSLAAATA ASIAARGRLP VVAGGSNSLI HALLADRLDA GAADPFSAPP QPAPPRWGRR PALRSPCCLL
201: WVHVDAALLA EYLDRRVDDM VRGGMVEELR EYFAATTAAE RAAHAAGLGR AIGVPELGAC FAGRASFRAA IDDIKANTRD LAAAQVRKIR RMADAWGWPI
301: QRLDASATVR ARLRGAGPDA ESACWERDVR APGLAAIRSF LLELDGGSVV DGAVVEEVEP RVRCCDVVG

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.