Factsheet for Zm00001d011618_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043812_P001	Maize	plastid	87.93	86.44
KXG33157	Sorghum	mitochondrion, plastid	90.8	84.49
Os01t0688300-00	Rice	mitochondrion	70.11	72.62
TraesCS3B01G296500.1	Wheat	plastid	72.7	69.51
TraesCS3D01G263000.1	Wheat	plastid	73.28	69.11
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	72.7	68.56
Zm00001d038921_P001	Maize	mitochondrion, plastid	68.39	64.5
HORVU0Hr1G006770.3	Barley	cytosol	49.43	61.87
GSMUA_Achr1P12830_001	Banana	cytosol	20.69	59.5
GSMUA_Achr3P29480_001	Banana	cytosol	40.23	53.64
GSMUA_Achr2P06730_001	Banana	cytosol	15.52	51.92
GSMUA_Achr1P23110_001	Banana	cytosol	45.69	51.46
GSMUA_Achr4P06810_001	Banana	cytosol	43.97	50.0
PGSC0003DMT400015411	Potato	cytosol	33.05	41.37
KRH35941	Soybean	cytosol	35.34	40.46
Zm00001d034584_P001	Maize	plastid	37.93	40.12
VIT_01s0011g03640.t01	Wine grape	plastid	37.93	40.0
KRG90838	Soybean	mitochondrion	26.44	39.83
Solyc05g009410.1.1	Tomato	cytosol	32.18	39.58
CDY07385	Canola	plastid	36.21	39.38
Zm00001d013021_P001	Maize	plastid	37.36	38.58
Bra004037.1-P	Field mustard	plastid	36.78	38.44
CDY04228	Canola	plastid	35.06	38.24
PGSC0003DMT400037749	Potato	cytosol	31.03	38.16
Solyc04g007240.1.1	Tomato	plastid	35.06	37.54
Zm00001d005239_P001	Maize	plastid	37.07	37.18
AT4G24650.1	Thale cress	cytosol	33.91	37.11
CDY44896	Canola	plastid	35.34	36.72
AT3G19160.1	Thale cress	plastid	34.77	36.67
CDX81518	Canola	plastid	35.63	35.63
Zm00001d019171_P001	Maize	plastid	37.07	35.44
CDY22984	Canola	plastid	31.03	35.18
GSMUA_Achr9P21400_001	Banana	cytosol	27.87	35.02
Bra033933.1-P	Field mustard	plastid	36.49	34.89
CDY18571	Canola	plastid	32.18	34.57
Bra037537.1-P	Field mustard	plastid	32.18	34.57
CDX95461	Canola	plastid	31.9	34.26
AT1G68460.1	Thale cress	plastid	35.06	34.17
Zm00001d040810_P001	Maize	cytosol	34.48	34.09
Zm00001d003869_P001	Maize	cytosol	31.03	33.54
CDX82308	Canola	plastid	31.03	33.13
Bra001737.1-P	Field mustard	plastid	30.46	32.42
AT1G25410.1	Thale cress	plastid	29.31	29.82
Zm00001d041982_P001	Maize	plastid	29.31	21.7
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	19.54	16.63

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	ProteinID:AQK97581.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	InterPro:IPT	UniProt:K7VKP7	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF40	SUPFAM:SSF52540	UniParc:UPI000220B11E	EnsemblPlantsGene:Zm00001d011618	EnsemblPlants:Zm00001d011618_P001	EnsemblPlants:Zm00001d011618_T001
SEG:seg	:	:	:	:	:

Description

isopentenyl transferase3 isopentenyl transferase3

Coordinates

chr8:-:156198746..156199792

Molecular Weight (calculated)

36608.1 Da

IEP (calculated)

9.886

GRAVY (calculated)

-0.101

Length

348 amino acids

Sequence
(BLAST)

001: MAAAAVAGIV SNDAPRKRPR RPPSGVRMEA MSRGGGCCCS SSDKKLEAAE PATTRLVVIV GATGTGKTKL SIDAAVALGG EVVNADKIQL YAGLDVTTNK
101: VPHADRRGVP HHLLGAVRAD AGELPAPSYR ALAAEAAASV AARGRVPVVA GGSNSLIHAL LAADSLGAGD PFKVDDGYRP SLRFPCCLLW VDVDGAVLDE
201: YLDRRVDDMV REGMVEELRE YFASAPPASH AAGLGKAIGV PELGAHFAGR KSLAAAIDEI KANTRVLAAA QVRKIRRMAG AWGWPVRRLD ATPTVRARLA
301: GAGRAAEAAA WERDVRGPGL AAMRQFLDGH EQQERWPLAR RQCRGMVV

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.