CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18571	Canola	plastid	96.91	96.91
CDY22984	Canola	plastid	76.54	80.78
CDX82308	Canola	plastid	79.63	79.14
AT3G19160.1	Thale cress	plastid	70.99	69.7
CDY07385	Canola	plastid	55.86	56.56
CDY04228	Canola	plastid	54.32	55.17
CDY44896	Canola	plastid	55.56	53.73
CDX81518	Canola	plastid	57.41	53.45
VIT_01s0011g03640.t01	Wine grape	plastid	54.32	53.33
KRH35941	Soybean	cytosol	49.07	52.3
GSMUA_Achr1P12830_001	Banana	cytosol	19.44	52.07
GSMUA_Achr2P06730_001	Banana	cytosol	16.67	51.92
KRG90838	Soybean	mitochondrion	35.19	49.35
PGSC0003DMT400015411	Potato	cytosol	42.28	49.28
PGSC0003DMT400037749	Potato	cytosol	41.98	48.06
Solyc05g009410.1.1	Tomato	cytosol	41.98	48.06
CDX93935	Canola	plastid	45.37	44.01
CDX89173	Canola	mitochondrion, plastid	45.06	43.71
Solyc04g007240.1.1	Tomato	plastid	43.83	43.69
CDY63340	Canola	plastid	43.83	42.77
CDY67797	Canola	mitochondrion	43.21	42.17
GSMUA_Achr1P23110_001	Banana	cytosol	37.96	39.81
GSMUA_Achr3P29480_001	Banana	cytosol	31.79	39.46
GSMUA_Achr4P06810_001	Banana	cytosol	37.04	39.22
Os07t0190150-00	Rice	cytosol	27.47	37.87
CDX77492	Canola	plastid	38.58	37.65
CDX85119	Canola	plastid	38.27	37.35
CDY47191	Canola	cytosol	36.42	35.65
CDY02590	Canola	cytosol	36.42	35.33
CDX92563	Canola	mitochondrion	36.42	35.33
CDY13945	Canola	mitochondrion	36.11	35.03
Os01t0688300-00	Rice	mitochondrion	35.8	34.52
Os05t0551700-01	Rice	mitochondrion	35.8	32.22
CDY18104	Canola	cytosol	28.09	32.16
TraesCS1B01G396700.1	Wheat	plastid	34.26	32.08
HORVU0Hr1G006770.3	Barley	cytosol	27.47	32.01
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	36.42	31.98
Zm00001d011618_P001	Maize	plastid	34.26	31.9
TraesCS3B01G296500.1	Wheat	plastid	35.49	31.59
TraesCS3D01G263000.1	Wheat	plastid	35.8	31.44
Zm00001d043812_P001	Maize	plastid	33.33	30.51
HORVU1Hr1G083530.2	Barley	plastid	35.19	30.4
Zm00001d038921_P001	Maize	mitochondrion, plastid	34.57	30.35
KXG33157	Sorghum	mitochondrion, plastid	34.88	30.21
TraesCS1A01G376300.1	Wheat	plastid	36.11	29.77
KXG22495	Sorghum	mitochondrion	35.49	29.56
TraesCS1D01G383600.1	Wheat	plastid	35.49	29.34
GSMUA_Achr9P21400_001	Banana	cytosol	24.07	28.16
CDY30532	Canola	cytosol	34.26	23.92
CDY45111	Canola	plastid	14.2	20.91
CDX77133	Canola	plastid	35.49	16.2
CDX88863	Canola	plastid	22.53	15.77
CDX70907	Canola	plastid	21.91	15.33

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	GO:A0A078E289	EnsemblPlants:CDX95461
ProteinID:CDX95461	ProteinID:CDX95461.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00101234001	InterPro:IPT
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF51	MetaCyc:PWY-2781	SUPFAM:SSF52540
UniParc:UPI0004EDD15E	SEG:seg	:	:	:	:

Description

BnaC01g33530D

Coordinates

chrLK031889:+:399983..401929

Molecular Weight (calculated)

36782.2 Da

IEP (calculated)

8.681

GRAVY (calculated)

-0.351

Length

324 amino acids

Sequence
(BLAST)

001: MQALTSSFVS RSLVPTTPRR HRVRPLSVAP MTVCIDQSRK EKVVVIMGST GTGKSRLSVD LATRFSAEII NSDKMQFYKG LEITTNQITI PEKCGVPHHL
101: LGELPVDGPE LTASEFRSLA SGSISDMTSR GKLPIIAGGS NSYIHALLVE HFDPETNPFS KPLIPIELRY DCCFLWVDVS VSVLYHYLSK RVDQMMESGM
201: FEELADFYNS RDSRSTTRTG IHKSIGVPEF DRYFGVYPPE KNDKVCGWDP ARKVAYEEAV QEIKENTWRL SKKQIDRIMK LRSSGWEIHR LDATASFRAQ
301: SREVWDKNVL EKSVKIVKRF VLED

Best Arabidopsis Sequence Match ( AT3G19160.1 )
(BLAST)

001: MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH
101: HLLGELPPDD SELTTSEFRS LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV DVSVSVLFEY LSKRVDQMME
201: SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS
301: FGRSSREIWD NTVLDESIKV VKRFLVKDKV

Arabidopsis Description

IPT8Adenylate isopentenyltransferase 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.