CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038921_P001	Maize	mitochondrion, plastid	79.43	83.74
Os05t0551700-01	Rice	mitochondrion	63.75	68.89
TraesCS1B01G396700.1	Wheat	plastid	60.15	67.63
TraesCS1D01G383600.1	Wheat	plastid	64.78	64.29
HORVU1Hr1G083530.2	Barley	plastid	61.95	64.27
KXG33157	Sorghum	mitochondrion, plastid	61.7	64.17
TraesCS1A01G376300.1	Wheat	plastid	62.72	62.09
GSMUA_Achr1P12830_001	Banana	cytosol	17.74	57.02
GSMUA_Achr2P06730_001	Banana	cytosol	14.4	53.85
GSMUA_Achr3P29480_001	Banana	cytosol	34.19	50.96
GSMUA_Achr1P23110_001	Banana	cytosol	40.36	50.81
GSMUA_Achr4P06810_001	Banana	cytosol	36.76	46.73
PGSC0003DMT400015411	Potato	cytosol	31.11	43.53
VIT_01s0011g03640.t01	Wine grape	plastid	35.99	42.42
CDY07385	Canola	plastid	34.7	42.19
Bra004037.1-P	Field mustard	plastid	35.22	41.14
CDY04228	Canola	plastid	33.68	41.07
CDY44896	Canola	plastid	35.22	40.9
Solyc05g009410.1.1	Tomato	cytosol	29.56	40.64
KRH35941	Soybean	cytosol	31.62	40.46
Solyc04g007240.1.1	Tomato	plastid	33.68	40.31
CDX81518	Canola	plastid	35.99	40.23
PGSC0003DMT400037749	Potato	cytosol	28.79	39.58
CDY22984	Canola	plastid	31.11	39.41
AT1G68460.1	Thale cress	plastid	35.73	38.94
Bra033933.1-P	Field mustard	plastid	36.25	38.74
KRG90838	Soybean	mitochondrion	22.88	38.53
AT3G19160.1	Thale cress	plastid	32.13	37.88
AT4G24650.1	Thale cress	cytosol	30.08	36.79
CDX82308	Canola	plastid	30.59	36.5
OQU90772	Sorghum	plastid	31.62	36.18
Bra001737.1-P	Field mustard	plastid	30.33	36.09
Bra037537.1-P	Field mustard	plastid	29.82	35.8
CDY18571	Canola	plastid	29.82	35.8
CDX95461	Canola	plastid	29.56	35.49
EER96067	Sorghum	plastid	32.13	34.53
GSMUA_Achr9P21400_001	Banana	cytosol	24.42	34.3
EES12063	Sorghum	cytosol	28.28	32.35
EES02950	Sorghum	cytosol	30.33	32.07
AT1G25410.1	Thale cress	plastid	27.76	31.58
EES02135	Sorghum	cytosol, plastid	24.42	20.26
KXG36879	Sorghum	mitochondrion	18.25	15.96
OQU77179	Sorghum	mitochondrion	17.99	13.86

Protein Annotations

EnsemblPlants:KXG22495	EnsemblPlantsGene:SORBI_3009G223100	Gene3D:1.10.287.890	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase	KEGG:00908+2.5.1.75
MetaCyc:PWY-2781	PANTHER:PTHR11088	PANTHER:PTHR11088:SF32	PFAM:PF01715	ProteinID:KXG22495	ProteinID:KXG22495.1
SEG:seg	SUPFAM:SSF52540	UniParc:UPI00081AE530	UniProt:A0A1B6PAP1	MapMan:11.4.1.1	:

Description

hypothetical protein

Coordinates

chr9:+:56567273..56568899

Molecular Weight (calculated)

40874.5 Da

IEP (calculated)

8.085

GRAVY (calculated)

-0.070

Length

389 amino acids

Sequence
(BLAST)

001: MTTLLANRIT TLVRAPPMAA TAAAAVAVAG GRRPLHRTFA HPEMEMEEEH QQRACRSRGS SSSSSCSSSS STAASPARGS GTGIVVIVGA TGTGKTKLSI
101: DAAEAVGGEV VNADKIQLYA GLDITTNKVA PADRRGVPHH LLGAIRPDAG AFPPSTFRSV AGATTASIAA RRRVPIVAGG SNSLIHALLA DRFDSAADPF
201: SSSWVRHDRP ALRSPCCLLW VHVDDALLAE YLDRRVDDMV GGGMVEELRA YFATTTAAER AAHAAGLGRA IGVPELGAYF AGRTSFRAAI DDIKANTRDL
301: AAAQVSKIRR MADAWGWPIQ RLDASATVRA RIQGAGPDVE SACWERDVRG PGLAAIRSFL LELDSDSIIT NGSAEMEPEP RVRCCDVVG

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.