Factsheet for Os05t0551700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G396700.1	Wheat	plastid	66.39	69.08
Os01t0688300-00	Rice	mitochondrion	63.06	67.56
TraesCS1D01G383600.1	Wheat	plastid	71.94	66.07
Zm00001d038921_P001	Maize	mitochondrion, plastid	66.94	65.31
TraesCS1A01G376300.1	Wheat	plastid	70.28	64.38
HORVU1Hr1G083530.2	Barley	plastid	66.67	64.0
KXG22495	Sorghum	mitochondrion	68.89	63.75
GSMUA_Achr1P12830_001	Banana	cytosol	19.17	57.02
Os07t0190150-00	Rice	cytosol	35.0	53.62
GSMUA_Achr2P06730_001	Banana	cytosol	15.0	51.92
GSMUA_Achr3P29480_001	Banana	cytosol	36.39	50.19
GSMUA_Achr1P23110_001	Banana	cytosol	42.78	49.84
GSMUA_Achr4P06810_001	Banana	cytosol	40.56	47.71
PGSC0003DMT400015411	Potato	cytosol	33.89	43.88
KRH35941	Soybean	cytosol	34.17	40.46
CDY07385	Canola	plastid	35.83	40.31
VIT_01s0011g03640.t01	Wine grape	plastid	36.94	40.3
Solyc05g009410.1.1	Tomato	cytosol	31.67	40.28
PGSC0003DMT400037749	Potato	cytosol	31.39	39.93
Solyc04g007240.1.1	Tomato	plastid	35.56	39.38
Bra004037.1-P	Field mustard	plastid	36.39	39.34
CDY04228	Canola	plastid	34.72	39.19
CDY44896	Canola	plastid	36.11	38.81
AT1G68460.1	Thale cress	plastid	38.33	38.66
KRG90838	Soybean	mitochondrion	24.72	38.53
AT3G19160.1	Thale cress	plastid	35.28	38.48
CDX81518	Canola	plastid	36.94	38.22
AT4G24650.1	Thale cress	cytosol	33.61	38.05
CDY22984	Canola	plastid	32.22	37.78
Bra033933.1-P	Field mustard	plastid	37.22	36.81
CDY18571	Canola	plastid	32.5	36.11
Bra037537.1-P	Field mustard	plastid	32.5	36.11
CDX95461	Canola	plastid	32.22	35.8
Os07t0211700-00	Rice	plastid	34.44	35.73
CDX82308	Canola	plastid	32.22	35.58
Os03t0356900-01	Rice	extracellular	31.94	35.38
Bra001737.1-P	Field mustard	plastid	31.67	34.86
GSMUA_Achr9P21400_001	Banana	cytosol	26.67	34.66
Os05t0311801-00	Rice	cytosol	32.5	34.31
Os03t0358900-00	Rice	cytosol	30.28	33.23
AT1G25410.1	Thale cress	plastid	30.83	32.46
Os03t0810100-01	Rice	extracellular	30.56	30.81
Os01t0968700-01	Rice	cytosol	29.44	22.94

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EntrezGene:4339535	ProteinID:AAT39273.1
EMBL:AB239804	ProteinID:BAF18164.2	ProteinID:BAS95219.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381
InterPro:IPT	EnsemblPlantsGene:Os05g0551700	EnsemblPlants:Os05t0551700-01	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF32	UniProt:Q6L4G2	SUPFAM:SSF52540	UniParc:UPI0000378074	RefSeq:XP_015638462.1	SEG:seg

Description

ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 7tRNA isopentenyltransferase family protein. (Os05t0551700-01)

Coordinates

chr5:-:27423027..27424795

Molecular Weight (calculated)

38789.3 Da

IEP (calculated)

8.112

GRAVY (calculated)

-0.166

Length

360 amino acids

Sequence
(BLAST)

001: MTSVATRIAT LVRAAAAASR PLRLHRRPGG EDTRMVVIVG ATGTGKTKLS IDAAKVIGGE VVNADKIQLY DGLDVTTNKV SLADRRGVPH HLLGAIRPEA
101: GELPPSSFRS LAAATAASIA ARRLVPVIAG GSNSLIHALL ADHFDASAGD PFSPAAAFRH YRPALRFPCC LLWVHVDEAL LDEYLDRRVD DMVDAGMVEE
201: LREYFATTTA AERAAHSGLG KAIGVPELGD YFAGRKTFSE AIDDIKANTR VLAAAQVSKI RRMSDAWGWP IHRLDASDTV RARLTRAGSA AESASWERDV
301: RGPGLATIRS FLADQSPPPR SEGTNDYLYA METEPEPPPP PTLPPRLLRL PRMQYCDMVG

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.