Factsheet for TraesCS1B01G396700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G383600.1	Wheat	plastid	92.77	81.89
TraesCS1A01G376300.1	Wheat	plastid	90.17	79.39
HORVU1Hr1G083530.2	Barley	plastid	84.1	77.6
Os05t0551700-01	Rice	mitochondrion	69.08	66.39
Zm00001d038921_P001	Maize	mitochondrion, plastid	67.92	63.69
TraesCS3B01G296500.1	Wheat	plastid	65.61	62.36
KXG22495	Sorghum	mitochondrion	67.63	60.15
GSMUA_Achr1P12830_001	Banana	cytosol	19.65	56.2
GSMUA_Achr3P29480_001	Banana	cytosol	40.17	53.26
GSMUA_Achr2P06730_001	Banana	cytosol	15.9	52.88
GSMUA_Achr1P23110_001	Banana	cytosol	45.66	51.13
GSMUA_Achr4P06810_001	Banana	cytosol	43.35	49.02
PGSC0003DMT400015411	Potato	cytosol	33.81	42.09
KRH35941	Soybean	cytosol	35.26	40.13
Solyc05g009410.1.1	Tomato	cytosol	32.08	39.22
CDY07385	Canola	plastid	36.13	39.06
PGSC0003DMT400037749	Potato	cytosol	31.79	38.87
VIT_01s0011g03640.t01	Wine grape	plastid	36.99	38.79
KRG90838	Soybean	mitochondrion	25.72	38.53
Bra004037.1-P	Field mustard	plastid	36.71	38.14
AT3G19160.1	Thale cress	plastid	35.84	37.58
Solyc04g007240.1.1	Tomato	plastid	35.26	37.54
CDY04228	Canola	plastid	34.1	36.99
CDY22984	Canola	plastid	32.66	36.81
CDY44896	Canola	plastid	35.55	36.72
CDX81518	Canola	plastid	36.13	35.92
AT4G24650.1	Thale cress	cytosol	32.95	35.85
TraesCS5B01G469600.1	Wheat	cytosol	36.13	35.61
CDX82308	Canola	plastid	32.95	34.97
Bra033933.1-P	Field mustard	plastid	36.71	34.89
GSMUA_Achr9P21400_001	Banana	cytosol	27.75	34.66
CDY18571	Canola	plastid	32.37	34.57
Bra037537.1-P	Field mustard	plastid	32.37	34.57
CDX95461	Canola	plastid	32.08	34.26
Bra001737.1-P	Field mustard	plastid	32.37	34.25
AT1G68460.1	Thale cress	plastid	34.97	33.89
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	31.21	33.13
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	32.95	32.95
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	30.06	32.4
AT1G25410.1	Thale cress	plastid	31.21	31.58
TraesCS1B01G323900.1	Wheat	plastid	21.68	26.79
TraesCS2B01G276300.2	Wheat	plastid	30.06	22.32
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	19.08	14.6

Protein Annotations

EnsemblPlants:TraesCS1B01G396700.1	EnsemblPlantsGene:TraesCS1B01G396700	Gene3D:1.10.287.890	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase	KEGG:00908+2.5.1.75
PANTHER:PTHR11088	PANTHER:PTHR11088:SF32	PFAM:PF01715	SEG:seg	SUPFAM:SSF52540	MapMan:11.4.1.1

Description

No Description!

Coordinates

chr1B:-:628497937..628499668

Molecular Weight (calculated)

36084.9 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.090

Length

346 amino acids

Sequence
(BLAST)

001: MTSSSSSCSS SSSSGGGGSG WGEGRPRLVV IVGATGTGKT KLSIDAARAL GGEVVNADKI QLYQGLDVTT NKVPLADRRG VAHHLLGAVP PDAGALPPSS
101: FRALADAKAA SIAARGMLTV VAGGSNSLIH ALLADLPDDA ALPEDPFSLD RSYRPALRYP CCLLWVDVEE ALLAEYLDRR VDDMVGAGMV EELREYFAAT
201: TPAERAAHAP GLGKAIGVPE LGEYLAGRRS FRAAVDDIKA NTRRLAAAQV GKIRRMADGW GWPVRRLDAS ATIRARLDGA GPAAESASWE RDVRGPGLAA
301: IRAFLADQAS HGHGNDATAS ANGVDEPPSP ALLMRLPRMQ CCDMVV

Best Arabidopsis Sequence Match ( AT3G19160.1 )
(BLAST)

001: MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH
101: HLLGELPPDD SELTTSEFRS LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV DVSVSVLFEY LSKRVDQMME
201: SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS
301: FGRSSREIWD NTVLDESIKV VKRFLVKDKV

Arabidopsis Description

IPT8Adenylate isopentenyltransferase 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.