Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G396700.1 | Wheat | plastid | 77.6 | 84.1 |
| TraesCS1D01G383600.1 | Wheat | plastid | 83.73 | 80.1 |
| TraesCS1A01G376300.1 | Wheat | plastid | 81.6 | 77.86 |
| Os05t0551700-01 | Rice | mitochondrion | 64.0 | 66.67 |
| Zm00001d038921_P001 | Maize | mitochondrion, plastid | 64.53 | 65.58 |
| KXG22495 | Sorghum | mitochondrion | 64.27 | 61.95 |
| HORVU0Hr1G006770.3 | Barley | cytosol | 44.8 | 60.43 |
| GSMUA_Achr1P12830_001 | Banana | cytosol | 17.87 | 55.37 |
| GSMUA_Achr3P29480_001 | Banana | cytosol | 37.33 | 53.64 |
| GSMUA_Achr2P06730_001 | Banana | cytosol | 14.67 | 52.88 |
| GSMUA_Achr1P23110_001 | Banana | cytosol | 41.07 | 49.84 |
| GSMUA_Achr4P06810_001 | Banana | cytosol | 39.73 | 48.69 |
| PGSC0003DMT400015411 | Potato | cytosol | 30.67 | 41.37 |
| CDY07385 | Canola | plastid | 35.2 | 41.25 |
| KRH35941 | Soybean | cytosol | 33.07 | 40.79 |
| KRG90838 | Soybean | mitochondrion | 24.8 | 40.26 |
| Bra004037.1-P | Field mustard | plastid | 35.73 | 40.24 |
| HORVU5Hr1G110100.1 | Barley | mitochondrion | 32.27 | 40.07 |
| VIT_01s0011g03640.t01 | Wine grape | plastid | 35.2 | 40.0 |
| CDY04228 | Canola | plastid | 33.6 | 39.5 |
| CDY44896 | Canola | plastid | 34.93 | 39.1 |
| Solyc05g009410.1.1 | Tomato | cytosol | 29.07 | 38.52 |
| PGSC0003DMT400037749 | Potato | cytosol | 29.07 | 38.52 |
| CDX81518 | Canola | plastid | 35.73 | 38.51 |
| AT3G19160.1 | Thale cress | plastid | 33.6 | 38.18 |
| CDY22984 | Canola | plastid | 31.2 | 38.11 |
| Solyc04g007240.1.1 | Tomato | plastid | 32.27 | 37.23 |
| AT4G24650.1 | Thale cress | cytosol | 31.47 | 37.11 |
| Bra033933.1-P | Field mustard | plastid | 36.0 | 37.09 |
| CDX82308 | Canola | plastid | 31.73 | 36.5 |
| HORVU5Hr1G055220.1 | Barley | cytosol, mitochondrion | 28.27 | 36.18 |
| HORVU5Hr1G055240.1 | Barley | cytosol, mitochondrion | 28.27 | 36.18 |
| AT1G68460.1 | Thale cress | plastid | 34.13 | 35.85 |
| CDY18571 | Canola | plastid | 30.93 | 35.8 |
| Bra037537.1-P | Field mustard | plastid | 30.93 | 35.8 |
| Bra001737.1-P | Field mustard | plastid | 31.2 | 35.78 |
| CDX95461 | Canola | plastid | 30.4 | 35.19 |
| GSMUA_Achr9P21400_001 | Banana | cytosol | 25.87 | 35.02 |
| HORVU3Hr1G025950.1 | Barley | cytosol | 30.13 | 32.66 |
| AT1G25410.1 | Thale cress | plastid | 29.33 | 32.16 |
| HORVU1Hr1G011480.1 | Barley | cytosol, mitochondrion, plastid | 29.6 | 28.32 |
| HORVU2Hr1G062320.8 | Barley | plastid | 30.13 | 23.69 |
| HORVU2Hr1G061970.1 | Barley | cytosol | 11.73 | 21.15 |
| HORVU2Hr1G061960.1 | Barley | cytosol | 11.73 | 21.15 |
| HORVU7Hr1G120070.12 | Barley | mitochondrion | 20.0 | 15.43 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G083530.2 | EnsemblPlantsGene:HORVU1Hr1G083530 | Gene3D:1.10.287.890 | Gene3D:3.40.50.300 | GO:GO:0006139 | GO:GO:0008033 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:IPT | InterPro:P-loop_NTPase | KEGG:00908+2.5.1.75 |
| PANTHER:PTHR11088 | PANTHER:PTHR11088:SF32 | PFAM:PF01715 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI000B460C0B |
| UniProt:A0A287GIT8 | MapMan:11.4.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:531991845..531992970
Molecular Weight (calculated)
39225.4 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.121
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: IITATILRRG GAPATSSRRR PLRICRPPMT SSPTSSSSSS CSSSSSSGCG GGGSGWGEED ARTRLVVIVG ATGTGKTKLS IDAARALGGE VVNADKMQLY
101: QGLDVTTNKV PIADRRGVAH HLLGAVPPEA GALPPSSFRP LAAAAVASIA ARGLLPVVAG GSNSLIHALL ADLPDEDDAA AAVPDDPFSL DADCGYRPAL
201: RFPCCLLWVD VEEALLAEYL DRRVDDMVGA GMVEELREYF AATTAAERAA HAAGLGKAIG VPELGEYLAG RRSFRSAVDD IKANTRRLAI AQVSKIRRMA
301: DGWGWPVRRL DASATIRARL AGAGPAAESA SWERDVRGPG LAAIRAFLAD QASRXEEEEE EERAWHGWQC HGGLL
101: QGLDVTTNKV PIADRRGVAH HLLGAVPPEA GALPPSSFRP LAAAAVASIA ARGLLPVVAG GSNSLIHALL ADLPDEDDAA AAVPDDPFSL DADCGYRPAL
201: RFPCCLLWVD VEEALLAEYL DRRVDDMVGA GMVEELREYF AATTAAERAA HAAGLGKAIG VPELGEYLAG RRSFRSAVDD IKANTRRLAI AQVSKIRRMA
301: DGWGWPVRRL DASATIRARL AGAGPAAESA SWERDVRGPG LAAIRAFLAD QASRXEEEEE EERAWHGWQC HGGLL
001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN
Arabidopsis Description
IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.