Factsheet for HORVU2Hr1G061970.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G061960.1	Barley	cytosol	100.0	100.0
HORVU2Hr1G062320.8	Barley	plastid	76.44	33.33
TraesCS2B01G276300.2	Wheat	plastid	74.52	33.26
TraesCS2D01G258000.3	Wheat	plastid	74.04	33.05
TraesCS2A01G265700.1	Wheat	plastid	60.58	29.17
Os01t0968700-01	Rice	cytosol	63.94	28.79
Zm00001d041982_P001	Maize	plastid	62.02	27.45
EES02135	Sorghum	cytosol, plastid	61.06	27.08
KRH25178	Soybean	cytosol	37.5	25.91
GSMUA_Achr11P...	Banana	cytosol	51.44	25.48
PGSC0003DMT400068271	Potato	cytosol	40.87	22.43
Bra034366.1-P	Field mustard	cytosol	43.27	19.44
CDY30532	Canola	cytosol	43.27	19.4
KRH30498	Soybean	cytosol	43.27	18.83
VIT_06s0061g01410.t01	Wine grape	nucleus	42.79	18.78
AT2G27760.1	Thale cress	cytosol	41.83	18.67
Solyc11g066960.1.1	Tomato	cytosol	40.87	18.2
HORVU5Hr1G110100.1	Barley	mitochondrion	23.56	16.23
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	19.71	13.99
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	19.71	13.99
HORVU3Hr1G025950.1	Barley	cytosol	23.08	13.87
HORVU0Hr1G006770.3	Barley	cytosol	17.79	13.31
CDX77133	Canola	plastid	42.79	12.54
HORVU1Hr1G083530.2	Barley	plastid	21.15	11.73
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	21.63	11.48
HORVU7Hr1G120070.12	Barley	mitochondrion	17.79	7.61

Protein Annotations

EnsemblPlants:HORVU2Hr1G061970.1	EnsemblPlantsGene:HORVU2Hr1G061970	Gene3D:1.10.20.140	Gene3D:1.10.287.890	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	KEGG:00908+2.5.1.75	PANTHER:PTHR11088
PANTHER:PTHR11088:SF26	PFAM:PF01715	SEG:seg	UniParc:UPI000B461D14	UniProt:A0A287I698	MapMan:50.2.5

Description

No Description!

Coordinates

chrchr2H:-:419189980..419191760

Molecular Weight (calculated)

24142.0 Da

IEP (calculated)

8.688

GRAVY (calculated)

-0.592

Length

208 amino acids

Sequence
(BLAST)

001: YLKECLKKYG MQVCKAYKTP MPTNGHLCTN ENRIGYEHLM EIDPIATQRI HPNNHRKIKR HLELYATIRA LPSNLFQGEA AKDKWGQPTS SRFDCCFLFV
101: DAELHVLNNY VNERVNSIIN VGMLDEVRNT YNRGVVYTQG LRQAIGVREF DEFFISYFTK KEPNNEMKAS MLDLHDDKLK SLLDEVVSQL KANTRKLVRR
201: QTEAAPSE

Best Arabidopsis Sequence Match ( AT2G27760.1 )
(BLAST)

001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN

Arabidopsis Description

IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.