Factsheet for Solyc11g066960.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068271	Potato	cytosol	77.09	94.99
Solyc11g063730.1.1	Tomato	cytosol	6.64	63.27
Solyc11g027990.1.1	Tomato	cytosol	7.49	59.32
Solyc11g019850.1.1	Tomato	cytosol	6.85	59.26
VIT_06s0061g01410.t01	Wine grape	nucleus	59.74	58.86
Solyc08g061790.1.1	Tomato	cytosol	7.71	58.06
Solyc11g061800.1.1	Tomato	cytosol	6.21	58.0
KRH30498	Soybean	cytosol	58.03	56.69
CDY30532	Canola	cytosol	56.1	56.47
Bra034366.1-P	Field mustard	cytosol	55.89	56.37
Solyc11g019900.1.1	Tomato	cytosol	7.07	55.93
AT2G27760.1	Thale cress	cytosol	55.25	55.36
Solyc11g061780.1.1	Tomato	cytosol	6.42	54.55
GSMUA_Achr11P...	Banana	cytosol	48.82	54.29
Solyc11g063470.1.1	Tomato	cytosol	6.21	53.7
Os01t0968700-01	Rice	cytosol	50.11	50.65
KRH25178	Soybean	cytosol	32.55	50.5
Zm00001d041982_P001	Maize	plastid	50.32	50.0
EES02135	Sorghum	cytosol, plastid	49.89	49.68
TraesCS2B01G276300.2	Wheat	plastid	49.46	49.57
TraesCS2D01G258000.3	Wheat	plastid	49.25	49.36
Solyc11g061860.1.1	Tomato	cytosol	14.35	48.2
HORVU2Hr1G062320.8	Barley	plastid	49.04	48.01
TraesCS2A01G265700.1	Wheat	plastid	44.11	47.69
Solyc11g020400.1.1	Tomato	cytosol	11.13	46.02
Solyc11g019880.1.1	Tomato	cytosol	11.78	45.45
Solyc11g063740.1.1	Tomato	cytosol	18.42	42.16
Solyc11g061870.1.1	Tomato	cytosol	18.2	41.67
HORVU2Hr1G061960.1	Barley	cytosol	18.2	40.87
HORVU2Hr1G061970.1	Barley	cytosol	18.2	40.87
Solyc11g063710.1.1	Tomato	cytosol	17.77	40.69
Solyc09g064910.1.1	Tomato	mitochondrion	27.19	40.45
Solyc11g019890.1.1	Tomato	cytosol	17.56	40.0
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	17.34	39.51
Solyc11g061830.1.1	Tomato	cytosol	17.13	39.22
Solyc11g061900.1.1	Tomato	cytosol	16.49	39.09
Solyc11g020380.1.1	Tomato	cytosol	16.06	37.88
Solyc05g009410.1.1	Tomato	cytosol	22.91	37.81
Solyc11g063690.1.1	Tomato	cytosol	12.85	37.74
CDX77133	Canola	plastid	56.53	37.18
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	14.13	36.67
Solyc11g061890.1.1	Tomato	cytosol	9.64	36.29
Solyc04g007240.1.1	Tomato	plastid	25.05	36.0
Solyc08g061690.1.1	Tomato	cytosol	14.56	34.34
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	23.34	33.13
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	16.7	25.66
Solyc12g014190.1.1	Tomato	mitochondrion	19.06	19.82

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005829	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009824	GO:GO:0009987
GO:GO:0016740	GO:GO:0052381	InterPro:IPT	UniProt:K4D9V3	HAMAP:MF_00185	InterPro:P-loop_NTPase
PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF26	SUPFAM:SSF52540	SUPFAM:SSF57667	EnsemblPlantsGene:Solyc11g066960.1
EnsemblPlants:Solyc11g066960.1.1	TIGRFAMs:TIGR00174	UniParc:UPI000276A15A	InterPro:Znf_C2H2_sf	SEG:seg	:

Description

tRNA dimethylallyltransferase 2 [Source:Projected from Arabidopsis thaliana (AT2G27760) UniProtKB/Swiss-Prot;Acc:Q9ZUX7]

Coordinates

chr11:-:52742206..52748912

Molecular Weight (calculated)

53069.4 Da

IEP (calculated)

6.697

GRAVY (calculated)

-0.416

Length

467 amino acids

Sequence
(BLAST)

001: MEIVEKLQNP NNGGEIKLNP TSNSKPKVVV IMGATGSGKS KLAIDLASHF PIEIINADSM QVYQGLDVLT NKVTPQEQKG VPHHLLGTIS PCVEFTAKDF
101: RDSTISIINE IWLRNRLPVI VGGTNYYIQA LVSPFLLDDS VEDAEANCLS DFQEDEKPDL EVELINEDYD CAYNRLKDID PVAANRIHPN NGRKINQYLN
201: LYARFGVIPS KLLQEKTVEN WGQVDNSRYD FCFLCVNASL TTLDPFVDRR VDHMVDAGLL KEVLDIYVMN ADYTKGLRQA IGVREFESFL RCYILEHQKP
301: CSGSHDQTLN DQILKQNIQH FVGSPDDNEW KALLTEAIQQ VKLNTRRLVR RQRRRLNRLQ MLYGWNIHYV DATKSIISGS DDIWTVEVVK PSVGIIKSFL
401: TGESSTEIGS NASEETKMIQ KDLWTQHVCE ACGNKVLRGM HEWEQHRQGR GHRKRISRLK KSGSLCL

Best Arabidopsis Sequence Match ( AT2G27760.1 )
(BLAST)

001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN

Arabidopsis Description

IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.