Factsheet for Solyc11g019900.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g063730.1.1	Tomato	cytosol	62.71	75.51
Solyc11g061800.1.1	Tomato	cytosol	62.71	74.0
Solyc11g027990.1.1	Tomato	cytosol	72.88	72.88
Solyc08g061790.1.1	Tomato	cytosol	74.58	70.97
Solyc11g019850.1.1	Tomato	cytosol	62.71	68.52
Solyc11g061780.1.1	Tomato	cytosol	62.71	67.27
Solyc11g063470.1.1	Tomato	cytosol	61.02	66.67
Solyc11g061860.1.1	Tomato	cytosol	77.97	33.09
Solyc11g020400.1.1	Tomato	cytosol	61.02	31.86
Solyc11g019880.1.1	Tomato	cytosol	61.02	29.75
PGSC0003DMT400093770	Potato	cytosol, mitochondrion, plastid	79.66	23.86
Solyc11g063710.1.1	Tomato	cytosol	79.66	23.04
Solyc11g061870.1.1	Tomato	cytosol	76.27	22.06
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	76.27	21.95
Solyc11g063740.1.1	Tomato	cytosol	74.58	21.57
Solyc11g019890.1.1	Tomato	cytosol	74.58	21.46
Solyc11g061830.1.1	Tomato	cytosol	72.88	21.08
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	59.32	19.44
Solyc11g061900.1.1	Tomato	cytosol	64.41	19.29
Solyc08g061690.1.1	Tomato	cytosol	62.71	18.69
Solyc11g020380.1.1	Tomato	cytosol	55.93	16.67
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	76.27	14.8
Solyc11g063690.1.1	Tomato	cytosol	35.59	13.21
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	57.63	13.18
Solyc09g064910.1.1	Tomato	mitochondrion	66.1	12.42
Solyc05g009410.1.1	Tomato	cytosol	59.32	12.37
HORVU5Hr1G110100.1	Barley	mitochondrion	59.32	11.59
TraesCS1B01G323900.1	Wheat	plastid	52.54	11.07
TraesCS5A01G181100.1	Wheat	mitochondrion	52.54	10.62
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	52.54	10.58
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	52.54	10.58
Solyc04g007240.1.1	Tomato	plastid	57.63	10.46
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	57.63	10.33
TraesCS5A01G460000.1	Wheat	plastid	61.02	10.26
TraesCS5B01G469600.1	Wheat	cytosol	59.32	9.97
TraesCS5D01G471100.1	Wheat	cytosol	59.32	9.97
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	54.24	9.97
OQU90772	Sorghum	plastid	55.93	9.71
Os05t0311801-00	Rice	cytosol	55.93	9.68
TraesCS5D01G185500.1	Wheat	plastid	52.54	9.66
KRH01762	Soybean	extracellular, golgi, vacuole	54.24	9.61
KRH46921	Soybean	cytosol	47.46	9.56
Zm00001d034584_P001	Maize	plastid	52.54	9.42
Os03t0356900-01	Rice	extracellular	50.85	9.23
Zm00001d005239_P001	Maize	plastid	54.24	9.22
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	50.85	9.2
EER96067	Sorghum	plastid	55.93	9.12
Zm00001d003869_P001	Maize	cytosol	49.15	9.01
EES02950	Sorghum	cytosol	55.93	8.97
Os03t0810100-01	Rice	extracellular	54.24	8.96
Zm00001d013021_P001	Maize	plastid	50.85	8.9
TraesCS3D01G137000.1	Wheat	cytosol, plastid	52.54	8.86
Os03t0358900-00	Rice	cytosol	49.15	8.84
Zm00001d040810_P001	Maize	cytosol	52.54	8.81
Zm00001d019171_P001	Maize	plastid	54.24	8.79
TraesCS3A01G136200.1	Wheat	mitochondrion	50.85	8.67
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	50.85	8.67
HORVU3Hr1G025950.1	Barley	cytosol	50.85	8.67
Os07t0211700-00	Rice	plastid	49.15	8.36
EES12063	Sorghum	cytosol	47.46	8.24
TraesCS1A01G057000.1	Wheat	cytosol	52.54	7.95
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	52.54	7.91
Solyc11g066960.1.1	Tomato	cytosol	55.93	7.07
Solyc12g014190.1.1	Tomato	mitochondrion	35.59	4.68
Solyc11g061890.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc11g019900.1.1	EnsemblPlantsGene:Solyc11g019900.1	Gene3D:3.40.50.300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	PANTHER:PTHR11088
PANTHER:PTHR11088:SF25	UniParc:UPI000276AA87	UniProt:K4D6U3	MapMan:50.2.5	:	:

Description

No Description!

Coordinates

chr11:+:9733756..9733935

Molecular Weight (calculated)

6840.6 Da

IEP (calculated)

10.894

GRAVY (calculated)

-0.178

Length

59 amino acids

Sequence
(BLAST)

1: MWVTGTGKSR LPIDLATHFR GEIINSDKMQ VYKRLQIVTN KITHTKKLGV RHYLLGIYV

Best Arabidopsis Sequence Match ( AT5G19040.1 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.