Factsheet for Solyc11g027990.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g061800.1.1	Tomato	cytosol	67.8	80.0
Solyc11g063730.1.1	Tomato	cytosol	66.1	79.59
Solyc11g019900.1.1	Tomato	cytosol	72.88	72.88
Solyc11g061780.1.1	Tomato	cytosol	67.8	72.73
Solyc11g019850.1.1	Tomato	cytosol	64.41	70.37
Solyc11g063470.1.1	Tomato	cytosol	64.41	70.37
Solyc08g061790.1.1	Tomato	cytosol	71.19	67.74
Solyc11g061860.1.1	Tomato	cytosol	77.97	33.09
Solyc11g020400.1.1	Tomato	cytosol	62.71	32.74
Solyc11g019880.1.1	Tomato	cytosol	64.41	31.41
Solyc11g061870.1.1	Tomato	cytosol	77.97	22.55
Solyc11g063710.1.1	Tomato	cytosol	77.97	22.55
Solyc11g063740.1.1	Tomato	cytosol	76.27	22.06
Solyc11g061830.1.1	Tomato	cytosol	74.58	21.57
Solyc11g019890.1.1	Tomato	cytosol	74.58	21.46
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	74.58	21.46
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	64.41	21.11
Solyc11g061900.1.1	Tomato	cytosol	67.8	20.3
Solyc08g061690.1.1	Tomato	cytosol	62.71	18.69
Solyc11g020380.1.1	Tomato	cytosol	61.02	18.18
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	74.58	14.47
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	61.02	13.95
Solyc05g009410.1.1	Tomato	cytosol	66.1	13.78
Solyc11g063690.1.1	Tomato	cytosol	33.9	12.58
Solyc09g064910.1.1	Tomato	mitochondrion	66.1	12.42
TraesCS5A01G181100.1	Wheat	mitochondrion	61.02	12.33
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	61.02	12.29
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	61.02	12.29
HORVU5Hr1G110100.1	Barley	mitochondrion	62.71	12.25
TraesCS1B01G323900.1	Wheat	plastid	55.93	11.79
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	62.71	11.53
Solyc04g007240.1.1	Tomato	plastid	62.71	11.38
KRH46921	Soybean	cytosol	55.93	11.26
TraesCS5D01G185500.1	Wheat	plastid	61.02	11.21
TraesCS5A01G460000.1	Wheat	plastid	66.1	11.11
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	61.02	10.94
TraesCS5D01G471100.1	Wheat	cytosol	64.41	10.83
TraesCS5B01G469600.1	Wheat	cytosol	64.41	10.83
KRH01762	Soybean	extracellular, golgi, vacuole	61.02	10.81
Zm00001d034584_P001	Maize	plastid	59.32	10.64
OQU90772	Sorghum	plastid	61.02	10.59
Os03t0356900-01	Rice	extracellular	57.63	10.46
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	57.63	10.43
Zm00001d005239_P001	Maize	plastid	61.02	10.37
Os05t0311801-00	Rice	cytosol	59.32	10.26
Zm00001d003869_P001	Maize	cytosol	55.93	10.25
EER96067	Sorghum	plastid	62.71	10.22
Zm00001d013021_P001	Maize	plastid	57.63	10.09
Os03t0358900-00	Rice	cytosol	55.93	10.06
Os03t0810100-01	Rice	extracellular	59.32	9.8
Zm00001d040810_P001	Maize	cytosol	57.63	9.66
Zm00001d019171_P001	Maize	plastid	59.32	9.62
EES02950	Sorghum	cytosol	59.32	9.51
TraesCS3D01G137000.1	Wheat	cytosol, plastid	55.93	9.43
EES12063	Sorghum	cytosol	54.24	9.41
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	54.24	9.25
HORVU3Hr1G025950.1	Barley	cytosol	54.24	9.25
Os07t0211700-00	Rice	plastid	54.24	9.22
TraesCS1A01G057000.1	Wheat	cytosol	59.32	8.97
TraesCS3A01G136200.1	Wheat	mitochondrion	52.54	8.96
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	59.32	8.93
Solyc11g066960.1.1	Tomato	cytosol	59.32	7.49
Solyc12g014190.1.1	Tomato	mitochondrion	40.68	5.35
Solyc11g061890.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381
InterPro:IPT	UniProt:K4D7E2	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF25	EnsemblPlantsGene:Solyc11g027990.1
EnsemblPlants:Solyc11g027990.1.1	UniParc:UPI0002769934	:	:	:	:

Description

No Description!

Coordinates

chr11:+:19819035..19819357

Molecular Weight (calculated)

6703.1 Da

IEP (calculated)

7.780

GRAVY (calculated)

-0.225

Length

59 amino acids

Sequence
(BLAST)

1: MGATGTGKSS LSIDLATYFR GEIINSDKMQ VYKGLEIITN KITHTMKEDV HHYLLDFLR

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.