Factsheet for HORVU0Hr1G006770.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G263000.1	Wheat	plastid	78.42	59.08
TraesCS3B01G296500.1	Wheat	plastid	76.98	58.79
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	76.62	57.72
Os01t0688300-00	Rice	mitochondrion	65.83	54.46
Zm00001d011618_P001	Maize	plastid	61.87	49.43
Zm00001d043812_P001	Maize	plastid	61.51	48.31
KXG33157	Sorghum	mitochondrion, plastid	64.03	47.59
HORVU1Hr1G083530.2	Barley	plastid	60.43	44.8
GSMUA_Achr3P29480_001	Banana	cytosol	37.77	40.23
GSMUA_Achr4P06810_001	Banana	cytosol	43.53	39.54
GSMUA_Achr1P23110_001	Banana	cytosol	43.88	39.48
PGSC0003DMT400015411	Potato	cytosol	35.25	35.25
Solyc05g009410.1.1	Tomato	cytosol	32.37	31.8
HORVU5Hr1G110100.1	Barley	mitochondrion	34.53	31.79
PGSC0003DMT400037749	Potato	cytosol	32.01	31.45
GSMUA_Achr1P12830_001	Banana	cytosol	13.67	31.41
KRH35941	Soybean	cytosol	34.17	31.25
Solyc04g007240.1.1	Tomato	plastid	35.97	30.77
GSMUA_Achr2P06730_001	Banana	cytosol	11.51	30.77
CDY07385	Canola	plastid	35.25	30.62
Bra004037.1-P	Field mustard	plastid	35.97	30.03
VIT_01s0011g03640.t01	Wine grape	plastid	35.61	30.0
CDY04228	Canola	plastid	33.45	29.15
AT3G19160.1	Thale cress	plastid	33.45	28.18
CDY44896	Canola	plastid	33.45	27.76
CDY22984	Canola	plastid	30.58	27.69
CDX95461	Canola	plastid	32.01	27.47
CDX81518	Canola	plastid	34.17	27.3
CDY18571	Canola	plastid	31.65	27.16
Bra037537.1-P	Field mustard	plastid	31.65	27.16
AT4G24650.1	Thale cress	cytosol	30.94	27.04
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	28.42	26.96
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	28.42	26.96
AT1G68460.1	Thale cress	plastid	34.53	26.89
KRG90838	Soybean	mitochondrion	21.94	26.41
CDX82308	Canola	plastid	30.94	26.38
Bra033933.1-P	Field mustard	plastid	34.53	26.37
Bra001737.1-P	Field mustard	plastid	30.94	26.3
HORVU3Hr1G025950.1	Barley	cytosol	30.94	24.86
AT1G25410.1	Thale cress	plastid	30.58	24.85
GSMUA_Achr9P21400_001	Banana	cytosol	21.22	21.3
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	28.78	20.41
HORVU2Hr1G061970.1	Barley	cytosol	13.31	17.79
HORVU2Hr1G061960.1	Barley	cytosol	13.31	17.79
HORVU2Hr1G062320.8	Barley	plastid	26.62	15.51
HORVU7Hr1G120070.12	Barley	mitochondrion	19.06	10.91

Protein Annotations

EnsemblPlants:HORVU0Hr1G006770.3	EnsemblPlantsGene:HORVU0Hr1G006770	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	InterPro:IPT	KEGG:00908+2.5.1.75	ncoils:Coil	PANTHER:PTHR11088
PANTHER:PTHR11088:SF40	PFAM:PF01715	SEG:seg	UniParc:UPI000B47BA87	UniProt:A0A287DX52	MapMan:11.4.1.1

Description

No Description!

Coordinates

chrchrUn:+:39375011..39375990

Molecular Weight (calculated)

25773.8 Da

IEP (calculated)

9.564

GRAVY (calculated)

-0.124

Length

278 amino acids

Sequence
(BLAST)

001: VMNSIKDLNI NSSTXXXXXX XXXXXXXXXX XXLLGAVPAD AGELPASSFR SLAAAKAADI AARGRVPVVA GGSNSLIHAF LAQRFDGHAP RDPFAATATR
101: YRPALRFPCC LLWVHVDEAV LDEYLDRRVD DMLGQGMVEE LREYFATTSD SERASHAGLR KAIGVPEIGD YLAGRKSLRT AVDEIKENTR VLAAAQVGKI
201: RRMADGWGWP VRRLDATGTV LARLAGAGRD AEAAAWHRDV RGPGLAAMRQ FLRSQGLXXX XXXXXXXXXX XXXXXXXX

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.