Factsheet for Os01t0688300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	77.08	70.19
Zm00001d011618_P001	Maize	plastid	72.62	70.11
TraesCS3B01G296500.1	Wheat	plastid	75.89	70.05
TraesCS3D01G263000.1	Wheat	plastid	76.79	69.92
Zm00001d043812_P001	Maize	plastid	71.13	67.51
KXG33157	Sorghum	mitochondrion, plastid	74.11	66.58
HORVU0Hr1G006770.3	Barley	cytosol	54.46	65.83
Os05t0551700-01	Rice	mitochondrion	67.56	63.06
GSMUA_Achr1P12830_001	Banana	cytosol	21.13	58.68
GSMUA_Achr3P29480_001	Banana	cytosol	41.96	54.02
Os07t0190150-00	Rice	cytosol	36.61	52.34
GSMUA_Achr2P06730_001	Banana	cytosol	16.07	51.92
GSMUA_Achr1P23110_001	Banana	cytosol	47.62	51.78
GSMUA_Achr4P06810_001	Banana	cytosol	46.13	50.65
PGSC0003DMT400015411	Potato	cytosol	37.2	44.96
CDY07385	Canola	plastid	40.18	42.19
Solyc05g009410.1.1	Tomato	cytosol	35.12	41.7
CDY04228	Canola	plastid	39.29	41.38
PGSC0003DMT400037749	Potato	cytosol	34.82	41.34
Bra004037.1-P	Field mustard	plastid	40.77	41.14
KRH35941	Soybean	cytosol	37.2	41.12
Solyc04g007240.1.1	Tomato	plastid	39.29	40.62
VIT_01s0011g03640.t01	Wine grape	plastid	39.88	40.61
KRG90838	Soybean	mitochondrion	27.08	39.39
CDY44896	Canola	plastid	38.39	38.51
AT4G24650.1	Thale cress	cytosol	36.31	38.36
AT3G19160.1	Thale cress	plastid	37.2	37.88
CDX81518	Canola	plastid	38.99	37.64
CDY22984	Canola	plastid	33.93	37.13
AT1G68460.1	Thale cress	plastid	39.29	36.97
Os07t0211700-00	Rice	plastid	37.8	36.6
Bra033933.1-P	Field mustard	plastid	39.58	36.54
CDY18571	Canola	plastid	34.82	36.11
Bra037537.1-P	Field mustard	plastid	34.82	36.11
GSMUA_Achr9P21400_001	Banana	cytosol	29.76	36.1
CDX95461	Canola	plastid	34.52	35.8
Os05t0311801-00	Rice	cytosol	35.71	35.19
Os03t0356900-01	Rice	extracellular	33.93	35.08
CDX82308	Canola	plastid	33.93	34.97
Bra001737.1-P	Field mustard	plastid	33.33	34.25
Os03t0358900-00	Rice	cytosol	32.74	33.54
Os03t0810100-01	Rice	extracellular	35.42	33.33
AT1G25410.1	Thale cress	plastid	32.44	31.87
Os01t0968700-01	Rice	cytosol	32.14	23.38

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:AB239805	ProteinID:BAS73774.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	InterPro:IPT	EnsemblPlantsGene:Os01g0688300	EnsemblPlants:Os01t0688300-00
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF40	UniProt:Q33CD3	SUPFAM:SSF52540
UniParc:UPI00005DAD6D	SEG:seg	:	:	:	:

Description

ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 8Similar to Isopentenyl transferase IPT8. (Os01t0688300-00)

Coordinates

chr1:+:28403683..28404693

Molecular Weight (calculated)

35315.1 Da

IEP (calculated)

6.899

GRAVY (calculated)

-0.064

Length

336 amino acids

Sequence
(BLAST)

001: MERSRVGDGC CCSCSGRGGV ASTTAVRPST GMVVIVGATG TGKTKLSIDA AQELAGEVVN ADKIQLYDGL DVTTNKVSLA DRRGVPHHLL GAIRAEAGEL
101: PPSSFRSLAA AAAAGIASRG RVPVVAGGSN SLIHALLADP IDAAPRDPFA DADVGYRPAL RFPCCLLWVD VDDDVLDEYL DRRVDDMVGE GMVEELEEYF
201: ATTSASERAS HAGLGKAIGV PELGDYFAGR KSLDAAIDEI KANTRVLAAR QVGKIRRMAD VWGWPIRRLD ATATIRARLS GAGRAAEAAA WERDVRGPGL
301: AAMRQFVGRA DFNAAAVDQL AARSRRQCLR GGMVAG

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.