Factsheet for Bra001737.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82308	Canola	plastid	95.72	96.01
Bra037537.1-P	Field mustard	plastid	78.29	79.01
AT3G19160.1	Thale cress	plastid	71.56	70.91
GSMUA_Achr2P06730_001	Banana	cytosol	17.13	53.85
Bra004037.1-P	Field mustard	plastid	54.74	53.75
GSMUA_Achr1P12830_001	Banana	cytosol	19.57	52.89
VIT_01s0011g03640.t01	Wine grape	plastid	52.29	51.82
KRH35941	Soybean	cytosol	47.09	50.66
Bra033933.1-P	Field mustard	plastid	55.05	49.45
PGSC0003DMT400015411	Potato	cytosol	41.59	48.92
PGSC0003DMT400037749	Potato	cytosol	40.98	47.35
Solyc05g009410.1.1	Tomato	cytosol	40.37	46.64
KRG90838	Soybean	mitochondrion	32.11	45.45
Solyc04g007240.1.1	Tomato	plastid	43.73	44.0
Bra007728.1-P	Field mustard	plastid	42.81	42.17
Bra040431.1-P	Field mustard	mitochondrion, plastid	42.81	41.92
GSMUA_Achr1P23110_001	Banana	cytosol	38.84	41.1
GSMUA_Achr4P06810_001	Banana	cytosol	38.23	40.85
GSMUA_Achr3P29480_001	Banana	cytosol	32.42	40.61
Os07t0190150-00	Rice	cytosol	26.91	37.45
Bra023701.1-P	Field mustard	cytosol	35.47	35.05
Bra014968.1-P	Field mustard	plastid	34.86	34.34
Bra002204.1-P	Field mustard	mitochondrion	34.86	34.13
Os01t0688300-00	Rice	mitochondrion	34.25	33.33
TraesCS1B01G396700.1	Wheat	plastid	34.25	32.37
Bra028326.1-P	Field mustard	plastid	29.66	32.23
Os05t0551700-01	Rice	mitochondrion	34.86	31.67
Zm00001d038921_P001	Maize	mitochondrion, plastid	35.47	31.44
TraesCS3B01G296500.1	Wheat	plastid	34.86	31.32
HORVU1Hr1G083530.2	Barley	plastid	35.78	31.2
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	35.17	31.17
TraesCS3D01G263000.1	Wheat	plastid	35.17	31.17
HORVU0Hr1G006770.3	Barley	cytosol	26.3	30.94
Zm00001d043812_P001	Maize	plastid	33.03	30.51
Zm00001d011618_P001	Maize	plastid	32.42	30.46
KXG22495	Sorghum	mitochondrion	36.09	30.33
TraesCS1D01G383600.1	Wheat	plastid	35.47	29.59
TraesCS1A01G376300.1	Wheat	plastid	35.17	29.26
KXG33157	Sorghum	mitochondrion, plastid	33.33	29.14
GSMUA_Achr9P21400_001	Banana	cytosol	24.16	28.52
Bra034366.1-P	Field mustard	cytosol	32.42	22.89
Bra006535.1-P	Field mustard	plastid	23.55	16.63
Bra020081.1-P	Field mustard	plastid	23.55	16.59

Protein Annotations

EnsemblPlants:Bra001737.1	EnsemblPlants:Bra001737.1-P	EnsemblPlantsGene:Bra001737	Gene3D:1.10.287.890	Gene3D:3.40.50.300	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase
KEGG:00908+2.5.1.75	PANTHER:PTHR11088	PANTHER:PTHR11088:SF51	PFAM:PF01715	SEG:seg	SUPFAM:SSF52540
UniParc:UPI00025404EC	UniProt:M4CC07	MapMan:11.4.1.1	:	:	:

Description

AT3G19160 (E=2e-122) ATIPT8, PGA22 | ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES); adenylate dimethylallyltransferase

Coordinates

chrA03:-:18178110..18179443

Molecular Weight (calculated)

37040.5 Da

IEP (calculated)

9.617

GRAVY (calculated)

-0.276

Length

327 amino acids

Sequence
(BLAST)

001: MHELTSTFVS RSLVPTTYTQ PPQLRPKSIV PMTVCMDQSR KEKVIVIMGA TGTGKSRLSV GLAARFSGEI INSDKMQFYN GLEIATNQIT IPERCGVAHH
101: LLGELPVDDS ELIASEFRSV ASRSISEISS RGKLPIIAGG SNSFVHALLV GRFDPVTNPF SSKPSISSEL RYDCFFLWVD VSASVLYHYL SKRVDKMMES
201: GMFEELASFY NPRNSRSTIR TGIHRAIGVP EFDRYFGVYP PEKSHNVFEW DQARKAAYEE LAVHEIKDNT WRLAKKQIER IMMLRSSGWE IHRLNATASL
301: RASSREVWEK NVLRESVKNV KRFLLTD

Best Arabidopsis Sequence Match ( AT3G19160.1 )
(BLAST)

001: MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH
101: HLLGELPPDD SELTTSEFRS LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV DVSVSVLFEY LSKRVDQMME
201: SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS
301: FGRSSREIWD NTVLDESIKV VKRFLVKDKV

Arabidopsis Description

IPT8Adenylate isopentenyltransferase 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.