Factsheet for Bra033933.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44896	Canola	plastid	90.66	98.51
CDX81518	Canola	plastid	92.86	97.13
Bra004037.1-P	Field mustard	plastid	79.12	86.49
AT1G68460.1	Thale cress	plastid	74.45	75.91
Bra037537.1-P	Field mustard	plastid	50.82	57.1
KRH35941	Soybean	cytosol	46.7	55.92
Bra001737.1-P	Field mustard	plastid	49.45	55.05
PGSC0003DMT400037749	Potato	cytosol	42.31	54.42
KRG90838	Soybean	mitochondrion	34.34	54.11
VIT_01s0011g03640.t01	Wine grape	plastid	48.08	53.03
GSMUA_Achr1P12830_001	Banana	cytosol	17.58	52.89
PGSC0003DMT400015411	Potato	cytosol	40.38	52.88
Solyc05g009410.1.1	Tomato	cytosol	40.93	52.65
GSMUA_Achr2P06730_001	Banana	cytosol	14.01	49.04
Solyc04g007240.1.1	Tomato	plastid	43.41	48.62
GSMUA_Achr1P23110_001	Banana	cytosol	37.91	44.66
GSMUA_Achr3P29480_001	Banana	cytosol	31.87	44.44
Bra040431.1-P	Field mustard	mitochondrion, plastid	40.11	43.71
GSMUA_Achr4P06810_001	Banana	cytosol	35.71	42.48
Bra007728.1-P	Field mustard	plastid	38.74	42.47
Os01t0688300-00	Rice	mitochondrion	36.54	39.58
Bra014968.1-P	Field mustard	plastid	35.71	39.16
Os07t0190150-00	Rice	cytosol	24.73	38.3
Os05t0551700-01	Rice	mitochondrion	36.81	37.22
Bra023701.1-P	Field mustard	cytosol	33.79	37.16
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	37.64	37.13
Bra002204.1-P	Field mustard	mitochondrion	33.79	36.83
TraesCS1B01G396700.1	Wheat	plastid	34.89	36.71
TraesCS3D01G263000.1	Wheat	plastid	37.09	36.59
Bra028326.1-P	Field mustard	plastid	30.22	36.54
TraesCS3B01G296500.1	Wheat	plastid	36.54	36.54
Zm00001d011618_P001	Maize	plastid	34.89	36.49
KXG22495	Sorghum	mitochondrion	38.74	36.25
Zm00001d038921_P001	Maize	mitochondrion, plastid	36.54	36.04
HORVU1Hr1G083530.2	Barley	plastid	37.09	36.0
TraesCS1D01G383600.1	Wheat	plastid	38.46	35.71
KXG33157	Sorghum	mitochondrion, plastid	36.54	35.56
TraesCS1A01G376300.1	Wheat	plastid	38.19	35.37
Zm00001d043812_P001	Maize	plastid	33.79	34.75
HORVU0Hr1G006770.3	Barley	cytosol	26.37	34.53
GSMUA_Achr9P21400_001	Banana	cytosol	25.0	32.85
Bra034366.1-P	Field mustard	cytosol	29.95	23.54
Bra006535.1-P	Field mustard	plastid	20.6	16.2
Bra020081.1-P	Field mustard	plastid	19.78	15.52

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:AB186132	ProteinID:BAE43826
ProteinID:BAE43826.1	EnsemblPlantsGene:Bra033933	EnsemblPlants:Bra033933.1	EnsemblPlants:Bra033933.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
InterPro:IPT	UniProt:M4EYP1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF51
SUPFAM:SSF52540	UniParc:UPI00025462CA	SEG:seg	:	:	:

Description

AT1G68460 (E=7e-127) ATIPT1 | ATIPT1 (isopentenyltransferase 1); adenylate dimethylallyltransferase

Coordinates

chrA02:-:10812339..10813433

Molecular Weight (calculated)

41650.6 Da

IEP (calculated)

8.746

GRAVY (calculated)

-0.379

Length

364 amino acids

Sequence
(BLAST)

001: MTELNFLPTI SDRFTTTSPS PSFSSHSLLP FTHRRTRQSN HRPVSVRMEQ SRPRNRKDKI VVILGATGAG KSRLSVDLAT RFPSEIINSD KIQVYEGLEI
101: TTNQITIPDR RGVPHHLLGY LPSEDGELTA GDFRADASNA VSDIISRKKL PIIAGGSNSF VHALLAERFD PKIDPFASSS ICRDLRYDSC FIWVDVSEPV
201: LFEYLLKRVD EMMGSGMFEE LSGFYDPVKA SRARFGIRKA IGVPEFDGYF KMYPPEKEVK WDSGRRAAYD KAVEDIKENT LRLARRQVWK IERLREAGWD
301: IKRVDATASF RAVMMSSSSS REWREIWEEQ VLEPSVKIVN RLLVEDWVIS QPFSSSFFFC FSYH

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.