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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytoskeleton 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07385 Canola plastid 96.1 100.0
Bra033933.1-P Field mustard plastid 86.49 79.12
AT1G68460.1 Thale cress plastid 75.68 70.59
Bra037537.1-P Field mustard plastid 55.56 57.1
KRH35941 Soybean cytosol 50.15 54.93
Bra001737.1-P Field mustard plastid 53.75 54.74
KRG90838 Soybean mitochondrion 36.34 52.38
VIT_01s0011g03640.t01 Wine grape plastid 51.05 51.52
PGSC0003DMT400037749 Potato cytosol 43.24 50.88
PGSC0003DMT400015411 Potato cytosol 41.74 50.0
GSMUA_Achr1P12830_001 Banana cytosol 18.02 49.59
Solyc05g009410.1.1 Tomato cytosol 42.04 49.47
GSMUA_Achr2P06730_001 Banana cytosol 14.71 47.12
Solyc04g007240.1.1 Tomato plastid 45.35 46.46
Bra040431.1-P Field mustard mitochondrion, plastid 43.24 43.11
GSMUA_Achr1P23110_001 Banana cytosol 39.34 42.39
GSMUA_Achr3P29480_001 Banana cytosol 32.43 41.38
Bra007728.1-P Field mustard plastid 41.14 41.27
Os07t0190150-00 Rice cytosol 28.83 40.85
GSMUA_Achr4P06810_001 Banana cytosol 37.54 40.85
Os01t0688300-00 Rice mitochondrion 41.14 40.77
TraesCS3A01G263300.1 Wheat mitochondrion, plastid 42.04 37.94
Bra014968.1-P Field mustard plastid 37.24 37.35
TraesCS3D01G263000.1 Wheat plastid 41.14 37.13
TraesCS3B01G296500.1 Wheat plastid 40.54 37.09
Zm00001d011618_P001 Maize plastid 38.44 36.78
TraesCS1B01G396700.1 Wheat plastid 38.14 36.71
Os05t0551700-01 Rice mitochondrion 39.34 36.39
HORVU0Hr1G006770.3 Barley cytosol 30.03 35.97
Bra023701.1-P Field mustard cytosol 35.74 35.95
HORVU1Hr1G083530.2 Barley plastid 40.24 35.73
TraesCS1D01G383600.1 Wheat plastid 42.04 35.71
Zm00001d043812_P001 Maize plastid 37.84 35.59
KXG33157 Sorghum mitochondrion, plastid 39.94 35.56
TraesCS1A01G376300.1 Wheat plastid 41.74 35.37
Bra002204.1-P Field mustard mitochondrion 35.44 35.33
Zm00001d038921_P001 Maize mitochondrion, plastid 39.04 35.23
KXG22495 Sorghum mitochondrion 41.14 35.22
Bra028326.1-P Field mustard plastid 31.53 34.88
GSMUA_Achr9P21400_001 Banana cytosol 24.02 28.88
Bra034366.1-P Field mustard cytosol 30.63 22.03
Bra006535.1-P Field mustard plastid 22.52 16.2
Bra020081.1-P Field mustard plastid 22.22 15.95
Protein Annotations
EnsemblPlants:Bra004037.1EnsemblPlants:Bra004037.1-PEnsemblPlantsGene:Bra004037Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139
GO:GO:0008033GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPase
KEGG:00908+2.5.1.75PANTHER:PTHR11088PANTHER:PTHR11088:SF51PFAM:PF01715SEG:segSUPFAM:SSF52540
UniParc:UPI00025419F9UniProt:M4CIK3MapMan:11.4.1.1:::
Description
AT1G68460 (E=2e-117) ATIPT1 | ATIPT1 (isopentenyltransferase 1); adenylate dimethylallyltransferase
Coordinates
chrA07:+:16456989..16457990
Molecular Weight (calculated)
37758.3 Da
IEP (calculated)
9.236
GRAVY (calculated)
-0.335
Length
333 amino acids
Sequence
(BLAST)
001: MTELNFLPTI SDHFTTTSTS LSFSSHSHFP FSVRMNDQSR PQNLKDKIVV ILGATGAGKS RLSVDIATRL PSEIINSDKI QLYKGLEITT NQITIPDRRG
101: VPHHLLGYLP SEDGELTARG FRIAASNAVS DITSRKKLPI IAGGSNTLVH ALLAERFDPK IDPFGSSSIS RELRYNCCFI WVDVSETVLF EYLLKRVDDM
201: MGSGMFEELS RFYDPVKAST TRVGIRKAIG VPEFDGYFKM YPPEKEGEWD SGRRAAYDKV VEEIKENTLR LAKRQVVKIE KLRDAGWDIK RVDATASFRA
301: VLMGRRRREW RGIWEEQVLE PSVKIVNRLL VED
Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)
001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN
Arabidopsis Description
IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.