Factsheet for Bra006535.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88863	Canola	plastid	97.19	97.19
CDX70907	Canola	plastid	96.76	96.76
Bra020081.1-P	Field mustard	plastid	86.83	86.64
AT5G20040.3	Thale cress	mitochondrion	80.56	79.53
VIT_19s0014g01630.t01	Wine grape	mitochondrion	59.83	69.95
PGSC0003DMT400039795	Potato	mitochondrion	62.2	64.0
Solyc12g014190.1.1	Tomato	mitochondrion	61.56	63.47
KRH21996	Soybean	mitochondrion	60.69	62.72
GSMUA_Achr1P06960_001	Banana	cytosol	30.67	57.03
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	49.68	56.23
KXG36879	Sorghum	mitochondrion	51.62	53.71
TraesCS7A01G560300.1	Wheat	mitochondrion	52.05	53.2
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	51.84	52.86
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	50.97	52.21
HORVU7Hr1G120070.12	Barley	mitochondrion	51.84	49.38
OQU77179	Sorghum	mitochondrion	50.32	46.14
Bra001737.1-P	Field mustard	plastid	16.63	23.55
Bra023701.1-P	Field mustard	cytosol	16.2	22.66
Bra007728.1-P	Field mustard	plastid	16.2	22.59
Bra004037.1-P	Field mustard	plastid	16.2	22.52
Bra040431.1-P	Field mustard	mitochondrion, plastid	15.77	21.86
Bra014968.1-P	Field mustard	plastid	15.55	21.69
Bra037537.1-P	Field mustard	plastid	15.12	21.6
Bra002204.1-P	Field mustard	mitochondrion	15.55	21.56
Bra033933.1-P	Field mustard	plastid	16.2	20.6
Bra028326.1-P	Field mustard	plastid	12.96	19.93
Bra034366.1-P	Field mustard	cytosol	17.71	17.71

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.40.50.300	MapMan:50.2.5	EnsemblPlantsGene:Bra006535	EnsemblPlants:Bra006535.1
EnsemblPlants:Bra006535.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
InterPro:IPT	UniProt:M4CQP4	HAMAP:MF_00185	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF50	SUPFAM:SSF52540	TIGRFAMs:TIGR00174	UniParc:UPI000253FFC7	SEG:seg	:

Description

AT5G20040 (E=2e-208) ATIPT9, IPT9 | ATIPT9; ATP binding / tRNA isopentenyltransferase

Coordinates

chrA03:-:3945025..3947697

Molecular Weight (calculated)

52246.9 Da

IEP (calculated)

7.625

GRAVY (calculated)

-0.416

Length

463 amino acids

Sequence
(BLAST)

001: MVTSSSVFLT ARTCCLRLQP PCLLLRRRLC GATACSVSLN GNTSNKKRNS DKEKVIVISG PTGAGKSRLA LELAKRLNGE IISADSVQVY KGLDVGSAKP
101: SASDRKEVPH HLIDILHPSQ DYSVGQFFED GRQATKDILS RGRVPIVTGG TGLYLRWFIY GKPDVPKPSP EIISEVHDIL LHFQTDHNWD AAVEFVVNAG
201: DQKASSLARN DWYRLKRSLE ILKSTGSPPS SFRVPYDSFR DNLNSPDAND DFSENDISVQ NVQTDLDYDF LCFFLSSPRI DLYRSIDLRC EDMLSGADGV
301: LSEARWLLDL GLLPNTSSAT RAIGYRQAME YLSKCRQQGG VSSPGEFYWF LNKFQQVSRN FAKRQMTWFR CEPMYHWLNA SKPLDTILEF IYDAYEKEAE
401: TLVVPDSIRM NKEMRNSREA NALKAYRPRN RHFVGREDCS SVLEWIRNEG CKSEVSCMEG AAI

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.