Factsheet for Zm00001d036339_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77179	Sorghum	mitochondrion	91.93	74.46
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	75.31	67.84
TraesCS7A01G560300.1	Wheat	mitochondrion	73.84	66.67
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	73.59	66.59
HORVU7Hr1G120070.12	Barley	mitochondrion	73.84	62.14
GSMUA_Achr1P06960_001	Banana	cytosol	37.16	61.04
VIT_19s0014g01630.t01	Wine grape	mitochondrion	56.48	58.33
KRH21996	Soybean	mitochondrion	57.7	52.68
PGSC0003DMT400039795	Potato	mitochondrion	57.21	52.0
Solyc12g014190.1.1	Tomato	mitochondrion	55.99	51.0
CDY45111	Canola	plastid	27.38	50.91
Bra006535.1-P	Field mustard	plastid	56.23	49.68
CDX88863	Canola	plastid	56.23	49.68
CDX70907	Canola	plastid	56.23	49.68
AT5G20040.3	Thale cress	mitochondrion	55.26	48.19
Bra020081.1-P	Field mustard	plastid	53.79	47.41
Zm00001d013021_P001	Maize	plastid	20.29	24.63
Zm00001d034584_P001	Maize	plastid	19.8	24.62
Zm00001d040810_P001	Maize	cytosol	19.8	23.01
Zm00001d005239_P001	Maize	plastid	19.32	22.77
Zm00001d003869_P001	Maize	cytosol	17.36	22.05
Zm00001d019171_P001	Maize	plastid	19.56	21.98
Zm00001d011618_P001	Maize	plastid	16.63	19.54
Zm00001d043812_P001	Maize	plastid	16.14	18.64
Zm00001d041982_P001	Maize	plastid	21.27	18.51
Zm00001d038921_P001	Maize	mitochondrion, plastid	15.89	17.62

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.40.50.300	MapMan:50.2.5	UniProt:A0A1D6LLW5	ProteinID:AQK80671.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	InterPro:IPT	HAMAP:MF_00185	InterPro:P-loop_NTPase	PFAM:PF01715
PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	SUPFAM:SSF52540	UniParc:UPI0008440FF6	EnsemblPlantsGene:Zm00001d036339	EnsemblPlants:Zm00001d036339_P001
EnsemblPlants:Zm00001d036339_T001	SEG:seg	:	:	:	:

Description

isopentenyl transferase10 isopentenyl transferase10

Coordinates

chr6:-:84773604..84774833

Molecular Weight (calculated)

45889.3 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.356

Length

409 amino acids

Sequence
(BLAST)

001: MAASSLPPPT HHKKKDTVIV ISGPTGAGKS RLALEVARRL GGEIISADSV QVYRGLDVGS AKPSAAEMSL VPHHLIDILD TSDDYSAGAF FRDARRATQD
101: VLDRGCVPVI AGGTGLYLRW YIYGKPNVPQ SSMESTLAVW SELADFRENG QWEEAVELVV QAGDPRARDL SVNNWNRLSR SLEIIRSSGS PPSAFALPYD
201: AFCEQHDTDL TEAPSSAGNY EAREMEYDFF CIFLASPRIE LYRSIDLRCE EMLVDTGGLL SEASWLLDIG LQPRMNSASS AIGYKQAMEY LLHCRQNGGE
301: STPQEFLDFL AKFQRTSRNF AKRQLTWFRN EKIYHWVDGS KPFEALVQFV CDAYHGCSAR MVPESLEMKR ENCVLKSRDL KTYRSMNRVF LGGDDCSHVL
401: NWIRRTQSK

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.