CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	74.46	91.93
KXG36879	Sorghum	mitochondrion	72.87	82.7
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	64.95	72.25
TraesCS7A01G560300.1	Wheat	mitochondrion	63.96	71.3
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	63.56	71.02
HORVU7Hr1G120070.12	Barley	mitochondrion	66.53	69.14
GSMUA_Achr1P06960_001	Banana	cytosol	30.3	61.45
VIT_19s0014g01630.t01	Wine grape	mitochondrion	45.74	58.33
KRH21996	Soybean	mitochondrion	47.92	54.02
PGSC0003DMT400039795	Potato	mitochondrion	47.72	53.56
Solyc12g014190.1.1	Tomato	mitochondrion	47.13	53.01
CDY45111	Canola	plastid	22.57	51.82
CDX70907	Canola	plastid	46.34	50.54
CDX88863	Canola	plastid	46.14	50.32
Bra006535.1-P	Field mustard	plastid	46.14	50.32
AT5G20040.3	Thale cress	mitochondrion	46.14	49.68
Bra020081.1-P	Field mustard	plastid	44.75	48.71
OQU90772	Sorghum	plastid	16.44	24.41
EER96067	Sorghum	plastid	16.83	23.48
EES02950	Sorghum	cytosol	15.64	21.47
EES12063	Sorghum	cytosol	13.86	20.59
EES02135	Sorghum	cytosol, plastid	18.42	19.83
KXG33157	Sorghum	mitochondrion, plastid	14.46	19.52
KXG22495	Sorghum	mitochondrion	13.86	17.99

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.40.50.300	MapMan:50.2.5	UniProt:A0A194YLW0	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	ProteinID:KXG20974.1
HAMAP:MF_00185	EnsemblPlants:OQU77179	ProteinID:OQU77179	ProteinID:OQU77179.1	ProteinID:OQU77180.1	ProteinID:OQU77181.1
ProteinID:OQU77182.1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	MetaCyc:PWY-2781
EnsemblPlantsGene:SORBI_3010G277700	SUPFAM:SSF52540	UniParc:UPI0007F1A765	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:61041128..61046037

Molecular Weight (calculated)

56893.6 Da

IEP (calculated)

8.901

GRAVY (calculated)

-0.449

Length

505 amino acids

Sequence
(BLAST)

001: MPVDRRSLPQ RRRRVLRALN SEARRPAAPR RRCHGGEAES CWLNRSRYRS SIMSGEMKPQ QLGVTRRAIW RTWPVLCSQS QHRLPSSFRA AKKIATMSTS
101: SLPPPTHQKK KDTVIVISGP TGAGKSRLAL EVARRLGGEI VSADSVQVYR GLDVGSAKPS AQEMSLVPHH LIDILDTSDD YSAGAFFHDA RRATQDVLDR
201: GCVPVVAGGT GLYLRWYIYG KPEVPQSSMD TTLAAWSELA DFRKTGQWEE AVELVVQAGD PKARGLSVNN WNRLSRSLEI IRSSGSPPSA FALPYNAFCE
301: QHDTGLTEAT FADGNCEARE LDYDFFCIFL ASPRIELYRS IDLRCEEMLA DTGGLLSEAS WLLDIGLQPR INSATSAIGY KQAMEYLLHC RQNGGESTPQ
401: EFLDFLAKFQ RTSRNFAKRQ LTWFRNEKIY HWVDGSQPFE ALVQFVCDAY HGCSARMVPE SLEMKRESCV LKSRDLKTYR SVNRVFLGDD DCSHVLNWIR
501: RTQGQ

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.