CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006535.1-P	Field mustard	plastid	97.19	97.19
CDX70907	Canola	plastid	96.76	96.76
CDY45111	Canola	plastid	41.9	88.18
AT5G20040.3	Thale cress	mitochondrion	81.43	80.38
VIT_19s0014g01630.t01	Wine grape	mitochondrion	59.61	69.7
PGSC0003DMT400039795	Potato	mitochondrion	62.42	64.22
Solyc12g014190.1.1	Tomato	mitochondrion	61.77	63.7
KRH21996	Soybean	mitochondrion	60.91	62.95
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	49.68	56.23
GSMUA_Achr1P06960_001	Banana	cytosol	30.24	56.22
KXG36879	Sorghum	mitochondrion	51.4	53.48
TraesCS7A01G560300.1	Wheat	mitochondrion	51.62	52.76
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	51.4	52.42
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	50.54	51.77
HORVU7Hr1G120070.12	Barley	mitochondrion	51.4	48.97
OQU77179	Sorghum	mitochondrion	50.32	46.14
CDY22984	Canola	plastid	16.41	24.76
CDY04228	Canola	plastid	16.2	23.51
CDY07385	Canola	plastid	16.2	23.44
CDX82308	Canola	plastid	16.2	23.01
CDY02590	Canola	cytosol	16.41	22.75
CDY63340	Canola	plastid	16.2	22.59
CDY67797	Canola	mitochondrion	16.2	22.59
CDX95461	Canola	plastid	15.77	22.53
CDY47191	Canola	cytosol	15.98	22.36
CDX93935	Canola	plastid	15.98	22.16
CDX85119	Canola	plastid	15.77	21.99
CDX77492	Canola	plastid	15.77	21.99
CDY18571	Canola	plastid	15.33	21.91
CDX89173	Canola	mitochondrion, plastid	15.77	21.86
CDY44896	Canola	plastid	15.77	21.79
CDY13945	Canola	mitochondrion	15.55	21.56
CDX92563	Canola	mitochondrion	15.55	21.56
CDX81518	Canola	plastid	15.98	21.26
CDY30532	Canola	cytosol	18.36	18.32
CDY18104	Canola	cytosol	10.58	17.31
CDX77133	Canola	plastid	18.57	12.11

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.40.50.300	MapMan:50.2.5	GO:A0A078DNS2	EnsemblPlants:CDX88863
ProteinID:CDX88863	ProteinID:CDX88863.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00148943001	InterPro:IPT
HAMAP:MF_00185	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	MetaCyc:PWY-2781
SUPFAM:SSF52540	TIGRFAMs:TIGR00174	UniParc:UPI0004EE1CB6	:	:	:

Description

BnaA03g07860D

Coordinates

chrLK031856:+:1329099..1331928

Molecular Weight (calculated)

52261.9 Da

IEP (calculated)

7.353

GRAVY (calculated)

-0.422

Length

463 amino acids

Sequence
(BLAST)

001: MLTSSSVFLT ARTCCLRLQP PCLILRRRLC GATACSVSLN GNTSNKKRNS EKEKVIVISG PTGAGKSRLA LELAKRLNGE IISADSVQVY KGLDVGSAKP
101: SASDRKEVPH HLIDILHPSQ DYSVGQFFED GRQATKDILS RGRVPIVTGG TGLYLRWFIY GKPDVPKPSP EIISEVHDTL LDFQTDHNWD AAVEFVVNAG
201: DQKASSIARN DWYRLKRSLE ILKSTGSPPS SFRVPYDSFR ENLNSPDAND DFSEDDISVQ NIQTDLDYDF LCFFLSSPRI DLYRSIDFRC EDMLSGANGV
301: LSEARWLLDL GLLPNTSSAT RAIGYRQAME YLSKCRQQGG VSSPGEFYWF LNKFQQVSRN FAKRQMTWFR CEPMYHWLNA SKPLDTILDF IYDAYEKEAE
401: TLVVPDSIRM NKEMRNSREA NALKAYRPRN RHFVGREDCS SVLEWIRSEG CKSEVSCMEG AAI

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.